RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 LCHNA4D1U4 455 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 RASSF10A6NK89 507 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 NDUFS2O75306 463 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 IFIT2P09913 472 aaKnown RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 BCAR1P56945 870 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 ERVFRD-1P60508 538 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 DBPQ10586 325 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SAFB2Q14151 953 aaKnown RBP eCLIP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SPIDRQ14159 915 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SAFBQ15424 915 aaKnown RBP eCLIP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 PRAMEF18Q5VWM3 479 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 PRAMEF9Q5VWM5 478 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 MBNL2Q5VZF2 373 aaKnown RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SLFN12LQ6IEE8 588 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 KCNK18Q7Z418 384 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SRGAP1Q7Z6B7 1085 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 CATIPQ7Z7H3 387 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 RTN4RL1Q86UN2 441 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 ARRDC4Q8NCT1 418 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 WDR48Q8TAF3 677 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 DDX11Q96FC9 970 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 TSPAN17Q96FV3 270 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 MAP3K14Q99558 947 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 MYL10Q9BUA6 226 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 ANLNQ9NQW6 1124 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 DTLQ9NZJ0 730 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 EDARQ9UNE0 448 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 SIT1Q9Y3P8 196 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 PPP2R3BQ9Y5P8 575 aa6.35□□□□□ -1.39
TRAPPC9-216ENST00000634178 MYO5CQ9NQX4 1742 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PRSS38A1L453 326 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 ABLIM1O14639 778 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PRLP01236 227 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 POU2F2P09086 479 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 ENO2P09104 434 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 CLEC2LP0C7M8 214 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 OSMP13725 252 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 SLC6A3Q01959 620 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 ALDH6A1Q02252 535 aaKnown RBP6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PLCL1Q15111 1095 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 MUM1Q2TAK8 710 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PITRM1Q5JRX3 1037 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 OLFML2BQ68BL8 750 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 SIRT2Q8IXJ6 389 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 FAM126BQ8IXS8 530 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 FOXRED1Q96CU9 486 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
TRAPPC9-216ENST00000634178 ALKQ9UM73 1620 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 ELL2O00472 640 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 C5AR1P21730 350 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 PTGS1P23219 599 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 AFMP43652 599 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 MAPKAPK2P49137 400 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 GPR15P49685 360 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 KIF23Q02241 960 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 GRM3Q14832 879 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 COBLL1Q53SF7 1204 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 CCDC178Q5BJE1 867 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 ATAT1Q5SQI0 421 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 B3GNT9Q6UX72 402 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 KANSL1Q7Z3B3 1105 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 THEMISQ8N1K5 641 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 OR14C36Q8NHC7 312 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 FATE1Q969F0 183 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 HPS3Q969F9 1004 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 TAAR9Q96RI9 348 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 KCTD10Q9H3F6 313 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 IFT122Q9HBG6 1241 aa6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 SUPT6HQ7KZ85 1726 aaKnown RBP6.33□□□□□ -1.4
TRAPPC9-216ENST00000634178 ABCA6Q8N139 1617 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 MYO3AQ8NEV4 1616 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 CEP170BQ9Y4F5 1589 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 MYPNQ86TC9 1320 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 LDHAP00338 332 aaKnown RBP6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 LPLP06858 475 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 XPAP23025 273 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 LGALS4P56470 323 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 ERVFC1P60507 584 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 NKX3-2P78367 333 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 MORC3Q14149 939 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 RAB3GAP1Q15042 981 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 FAM180AQ6UWF9 173 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 USP45Q70EL2 814 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 CHST15Q7LFX5 561 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 ZC3H18Q86VM9 953 aaKnown RBP6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 MIB1Q86YT6 1006 aa6.32□□□□□ -1.4
TRAPPC9-216ENST00000634178 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms