RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 IGFLR1Q9H665 355 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 CLDND1Q9NY35 253 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 RTEL1Q9NZ71 1219 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 PKD2L1Q9P0L9 805 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 GTF2IRD1Q9UHL9 959 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 MRPL11Q9Y3B7 192 aaKnown RBP5.5□□□□□ -1.53
LINC00550-201ENST00000629293 CACNA1AO00555 2505 aa5.5□□□□□ -1.53
LINC00550-201ENST00000629293 RSPH10B2B2RC85 870 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 BAIAP3O94812 1187 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 LARGE1O95461 756 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 RSPH10BP0C881 870 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 NCLP19338 710 aaKnown RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 EDNRBP24530 442 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ADCK5Q3MIX3 580 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 NXPE4Q6UWF7 544 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 MAP4K1Q92918 833 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ITPKCQ96DU7 683 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ANAPC4Q9UJX5 808 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 PCDHA1Q9Y5I3 950 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 WDR19Q8NEZ3 1342 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 SCN10AQ9Y5Y9 1956 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 TCHHQ07283 1943 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 GRM2Q14416 872 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 MBTPS1Q14703 1052 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 GPNMBQ14956 572 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 IFIT1BQ5T764 474 aaKnown RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 PEAR1Q5VY43 1037 aaPredicted RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 CCDC62Q6P9F0 684 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 IL31RAQ8NI17 732 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 EAF1Q96JC9 268 aaPredicted RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 CTAGE1Q96RT6 745 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 CNTN3Q9P232 1028 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ZNF232Q9UNY5 417 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 NCOR2Q9Y618 2525 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ABHD14A-ACY1A0A1B0GW23 586 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 KLRF2D3W0D1 207 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 PPFIA3O75145 1194 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 AMHP03971 560 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 MARK3P27448 753 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 LAMC2Q13753 1193 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 C4orf17Q53FE4 359 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 CREB3L3Q68CJ9 461 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 GALNT12Q8IXK2 581 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ENAHQ8N8S7 591 aaPredicted RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 RHOVQ96L33 236 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ZSCAN10Q96SZ4 725 aaPredicted RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 KATNAL1Q9BW62 490 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 BCO2Q9BYV7 579 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 JMJD4Q9H9V9 463 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 PXMP2Q9NR77 195 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 SETD4Q9NVD3 440 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ZSWIM5Q9P217 1185 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 PNMA2Q9UL42 364 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 INSL6Q9Y581 213 aa5.49□□□□□ -1.53
LINC00550-201ENST00000629293 RBM8AQ9Y5S9 174 aaKnown RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 GREB1LQ9C091 1923 aaPredicted RBP5.49□□□□□ -1.53
LINC00550-201ENST00000629293 ABCB11O95342 1321 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 EIF3JO75822 258 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ZSCAN22P10073 491 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 CTNNB1P35222 781 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SOX9P48436 509 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 IGBP1P78318 339 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 GPM6BQ13491 265 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ALX1Q15699 326 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 CYFIP1Q7L576 1253 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 TRMT1LQ7Z2T5 733 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 HSH2DQ96JZ2 352 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ZSCAN31Q96LW9 406 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 JAKMIP1Q96N16 626 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 AMNQ9BXJ7 453 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 GINS2Q9Y248 185 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 VPS13AQ96RL7 3174 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 C17orf102A2RUQ5 167 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SLC27A2O14975 620 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 GHRP10912 638 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 CPA1P15085 419 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SYT1P21579 422 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 UBA1P22314 1058 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ETFBP38117 255 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PTPN11Q06124 597 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 BMS1Q14692 1282 aaKnown RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 EPC2Q52LR7 807 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 HS1BP3Q53T59 392 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 TCEAL5Q5H9L2 206 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 FAM178BQ8IXR5 827 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 RHBDD1Q8TEB9 315 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 RNPEPQ9H4A4 650 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 C11orf16Q9NQ32 467 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PDRG1Q9NUG6 133 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 CEP250Q9BV73 2442 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SYCE3A1L190 88 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 STX6O43752 255 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms