RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 SLC7A3Q8WY07 619 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 DHX38Q92620 1227 aaKnown RBP8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 ZBTB10Q96DT7 871 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 CEP170P1Q96L14 293 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 MTMR9Q96QG7 549 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 JPH2Q9BR39 696 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 ZSCAN16Q9H4T2 348 aaPredicted RBP8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 RGL1Q9NZL6 768 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 CDY2AQ9Y6F7 541 aa8.07□□□□□ -1.12
NPLOC4-221ENST00000625705 TRIP12Q14669 1992 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 CENPFP49454 3210 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 WDR81Q562E7 1941 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SMIM35A0A1B0GVV1 85 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 MBLAC1A4D2B0 266 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 TMEM150BA6NC51 233 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 GHRP10912 638 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 HOXC8P31273 242 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 PRPHP41219 470 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 TOB1P50616 345 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 CLCN3P51790 818 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SPIRE1Q08AE8 756 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SF3A1Q15459 793 aaKnown RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SHHQ15465 462 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 FOXD4L6Q3SYB3 417 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 C9orf50Q5SZB4 431 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 KRT79Q5XKE5 535 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 EFCAB12Q6NXP0 572 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 FOXD4L3Q6VB84 417 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 ZNF365Q70YC5 407 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 C4orf19Q8IY42 314 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 EXOC8Q8IYI6 725 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 LRRC71Q8N4P6 559 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SEPT8Q92599 483 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 WNT8BQ93098 351 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 ZNF396Q96N95 335 aaPredicted RBP8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.124e-15■□□□□ 10.6
NPLOC4-221ENST00000625705 SH2D3AQ9BRG2 576 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 TUFT1Q9NNX1 390 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 MTMR6Q9Y217 621 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 PCDHA2Q9Y5H9 948 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 TRPV2Q9Y5S1 764 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 SLC4A7Q9Y6M7 1214 aa8.06□□□□□ -1.12
NPLOC4-221ENST00000625705 KDM3AQ9Y4C1 1321 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 SCN5AQ14524 2016 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ARHGEF35A5YM69 484 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 WFS1O76024 890 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 C22orf31O95567 290 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 VTNP04004 478 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 SSBP05455 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ZSCAN22P10073 491 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ATP4AP20648 1035 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 IBSPP21815 317 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 TXLNAP40222 546 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 RFC5P40937 340 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 EPHB4P54760 987 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ADAM17P78536 824 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ATP2C1P98194 919 aaPredicted RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 RBL2Q08999 1139 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 RESTQ13127 1097 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 PAK2Q13177 524 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 IKBKEQ14164 716 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 STK38Q15208 465 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 TRIM71Q2Q1W2 868 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 HABP4Q5JVS0 413 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ODR4Q5SWX8 454 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 MARCH8Q5T0T0 291 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ARL6IP4Q66PJ3 421 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 B3GNT9Q6UX72 402 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 NME8Q8N427 588 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 PIGOQ8TEQ8 1089 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 TCP11Q8WWU5 503 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 NLRP4Q96MN2 994 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 IFIH1Q9BYX4 1025 aaKnown RBP8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 CYP26B1Q9NR63 512 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 ARID2Q68CP9 1835 aa8.05□□□□□ -1.12
NPLOC4-221ENST00000625705 MYH15Q9Y2K3 1946 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 ZBTB42B2RXF5 422 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 GAS2O43903 313 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 USO1O60763 962 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 NBNO60934 754 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 EFCAB14O75071 495 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 BAIAP3O94812 1187 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 F13A1P00488 732 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 UBA7P41226 1012 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 NPEPPSP55786 919 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 NLRP11P59045 1033 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 NFX1Q12986 1120 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 EMC2Q15006 297 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 KIZQ2M2Z5 673 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 TMEM240Q5SV17 173 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 FAM173BQ6P4H8 233 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 TSHZ1Q6ZSZ6 1077 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 ANO5Q75V66 913 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 RHPN2Q8IUC4 686 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms