RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 RTF1Q92541 710 aaKnown RBP5.21□□□□□ -1.58
ATRX-209ENST00000623242 DDX11Q96FC9 970 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 ZNF496Q96IT1 587 aaPredicted RBP5.21□□□□□ -1.58
ATRX-209ENST00000623242 NOX5Q96PH1 765 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 GBP4Q96PP9 640 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 YIPF4Q9BSR8 244 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 AMNQ9BXJ7 453 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 PUS7LQ9H0K6 701 aaKnown RBP5.21□□□□□ -1.58
ATRX-209ENST00000623242 IRF2BPLQ9H1B7 796 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 SLC39A2Q9NP94 309 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 TOPORSQ9NS56 1045 aaPredicted RBP5.21□□□□□ -1.58
ATRX-209ENST00000623242 SIRT5Q9NXA8 310 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 FAM53CQ9NYF3 392 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 TRHDEQ9UKU6 1024 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 KNSTRNQ9Y448 316 aa5.21□□□□□ -1.58
ATRX-209ENST00000623242 POLR1AO95602 1720 aaPredicted RBP5.2□□□□□ -1.58
ATRX-209ENST00000623242 TRPM1Q7Z4N2 1603 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 ABCC11Q96J66 1382 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 PLEKHH1Q9ULM0 1364 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 PRAMEF22A3QJZ6 481 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 K7ESF4 209 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 GABRDO14764 452 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 LSP1P33241 339 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 EXOSC10Q01780 885 aaKnown RBP5.2□□□□□ -1.58
ATRX-209ENST00000623242 PFKPQ01813 784 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 MESP2Q0VG99 397 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 CNGB1Q14028 1251 aaPredicted RBP5.2□□□□□ -1.58
ATRX-209ENST00000623242 RTP5Q14D33 572 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 PDCD1Q15116 288 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 INAVAQ3KP66 663 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 PRAMEF18Q5VWM3 479 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 ERICH6BQ5W0A0 696 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 B3GNT8Q7Z7M8 397 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 STK32CQ86UX6 486 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 RASSF3Q86WH2 238 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 PASD1Q8IV76 773 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 POU5F2Q8N7G0 328 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 SMARCC2Q8TAQ2 1214 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 ERCC4Q92889 916 aaPredicted RBP5.2□□□□□ -1.58
ATRX-209ENST00000623242 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 ZDHHC5Q9C0B5 715 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 RNF38Q9H0F5 515 aa5.2□□□□□ -1.58
ATRX-209ENST00000623242 THRAP3Q9Y2W1 955 aaKnown RBP5.2□□□□□ -1.58
ATRX-209ENST00000623242 MSH6P52701 1360 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 TMEM94Q12767 1356 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 ELL2O00472 640 aaPredicted RBP5.19□□□□□ -1.58
ATRX-209ENST00000623242 NFIBO00712 420 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 C8AP07357 584 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 LIMS1P48059 325 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 DLG4P78352 724 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 NKX3-2P78367 333 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 ITKQ08881 620 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 ADAM9Q13443 819 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 MOGSQ13724 837 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 TARBP2Q15633 366 aaKnown RBP5.19□□□□□ -1.58
ATRX-209ENST00000623242 PHF19Q5T6S3 580 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 LRSAM1Q6UWE0 723 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 RAVER1Q8IY67 606 aaKnown RBP5.19□□□□□ -1.58
ATRX-209ENST00000623242 TMEFF1Q8IYR6 380 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 FAM9BQ8IZU0 186 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 DTX3Q8N9I9 347 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 FBXO15Q8NCQ5 510 aaPredicted RBP5.19□□□□□ -1.58
ATRX-209ENST00000623242 SCYL1Q96KG9 808 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 GORASP1Q9BQQ3 440 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 CDK19Q9BWU1 502 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 C14orf119Q9NWQ9 140 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 UCKL1Q9NWZ5 548 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 KLHL42Q9P2K6 505 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 ASB1Q9Y576 335 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 PTPRUQ92729 1446 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 ADGRB1O14514 1584 aa5.19□□□□□ -1.58
ATRX-209ENST00000623242 KIAA1210Q9ULL0 1709 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 PTCH1Q13635 1447 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 FAM135BQ49AJ0 1406 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 FZD9O00144 591 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 N4BP3O15049 544 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 KDM1AO60341 852 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 SEMA7AO75326 666 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 IL18BPO95998 194 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 PRLP01236 227 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 KRT1P04264 644 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 ENO2P09104 434 aaPredicted RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 CYP2C8P10632 490 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 PTGS1P23219 599 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 CD40P25942 277 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 IARSP41252 1262 aaKnown RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 ITGA1P56199 1179 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 FZD5Q13467 585 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 MYBPC3Q14896 1274 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 WDR43Q15061 677 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATRX-209ENST00000623242 ZBTB41Q5SVQ8 909 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 ZNF648Q5T619 568 aaPredicted RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 SYDE2Q5VT97 1194 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 ZC3H18Q86VM9 953 aaKnown RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 HIPK4Q8NE63 616 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 LMBR1Q8WVP7 490 aa5.18□□□□□ -1.58
ATRX-209ENST00000623242 AHCYL2Q96HN2 611 aaKnown RBP5.18□□□□□ -1.58
ATRX-209ENST00000623242 SMAD5Q99717 465 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms