RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 SEPT9Q9UHD8 586 aaPredicted RBP26.77■■□□□ 1.88
CPSF1-214ENST00000622776 PCDHA4Q9UN74 947 aa26.77■■□□□ 1.88
CPSF1-214ENST00000622776 STBD1O95210 358 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 TDP2O95551 362 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 SMC1AQ14683 1233 aaKnown RBP26.76■■□□□ 1.87
CPSF1-214ENST00000622776 IER5LQ5T953 404 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 TRIM22Q8IYM9 498 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 FBXL6Q8N531 539 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 PRSS33Q8NF86 280 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 CASP10Q92851 521 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 CEP89Q96ST8 783 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 MRPL9Q9BYD2 267 aaKnown RBP26.76■■□□□ 1.87
CPSF1-214ENST00000622776 CHST12Q9NRB3 414 aa26.76■■□□□ 1.87
CPSF1-214ENST00000622776 CYP3A7-CYP3A51PA0A087WV96 503 aa26.75■■□□□ 1.87
CPSF1-214ENST00000622776 TMEM150BA6NC51 233 aa26.75■■□□□ 1.87
CPSF1-214ENST00000622776 C2orf71A6NGG8 1288 aa26.75■■□□□ 1.87
CPSF1-214ENST00000622776 CYP3A7P24462 503 aa26.75■■□□□ 1.87
CPSF1-214ENST00000622776 SSRP1Q08945 709 aaKnown RBP26.75■■□□□ 1.87
CPSF1-214ENST00000622776 B3GNT9Q6UX72 402 aa26.75■■□□□ 1.87
CPSF1-214ENST00000622776 A0A087WZ62 844 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 IGKV6-21A0A0C4DH24 114 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 NT5C1B-RDH14C9J2C7 533 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 REC8O95072 547 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 ALDH7A1P49419 539 aaKnown RBP26.74■■□□□ 1.87
CPSF1-214ENST00000622776 DNM2P50570 870 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 BCAR1P56945 870 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 TOB2Q14106 344 aaPredicted RBP26.74■■□□□ 1.87
CPSF1-214ENST00000622776 PTPN21Q16825 1174 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 TPRNQ4KMQ1 711 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 SH2D3AQ9BRG2 576 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 FDXACB1Q9BRP7 624 aaPredicted RBP26.74■■□□□ 1.87
CPSF1-214ENST00000622776 HCFC2Q9Y5Z7 792 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 MYO10Q9HD67 2058 aa26.74■■□□□ 1.87
CPSF1-214ENST00000622776 PHKA2P46019 1235 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 RUFY3Q7L099 469 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 BLIDQ8IZY5 108 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 ASIC4Q96FT7 647 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 TMEM169Q96HH4 297 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 MBOAT7Q96N66 472 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 PRRX2Q99811 253 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 TRAIPQ9BWF2 469 aa26.73■■□□□ 1.87
CPSF1-214ENST00000622776 DDX11L8A8MPP1 907 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 M0R2N6 131 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 CLASP2O75122 1294 aaKnown RBP26.72■■□□□ 1.87
CPSF1-214ENST00000622776 SFPQP23246 707 aaKnown RBP eCLIP26.72■■□□□ 1.87
CPSF1-214ENST00000622776 SP100P23497 879 aaPredicted RBP26.72■■□□□ 1.87
CPSF1-214ENST00000622776 PTPN5P54829 565 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 MOXD1Q6UVY6 613 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 ZNF410Q86VK4 478 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 ETNPPLQ8TBG4 499 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 INO80BQ9C086 356 aaPredicted RBP26.72■■□□□ 1.87
CPSF1-214ENST00000622776 ZSWIM6Q9HCJ5 1215 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 SUCLA2Q9P2R7 463 aaPredicted RBP26.72■■□□□ 1.87
CPSF1-214ENST00000622776 CDH22Q9UJ99 828 aa26.72■■□□□ 1.87
CPSF1-214ENST00000622776 CPLX1O14810 134 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 MAFO75444 373 aaPredicted RBP26.71■■□□□ 1.87
CPSF1-214ENST00000622776 DEXIO95424 95 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 CXCL14O95715 111 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 BMS1Q14692 1282 aaKnown RBP26.71■■□□□ 1.87
CPSF1-214ENST00000622776 TWF2Q6IBS0 349 aaKnown RBP26.71■■□□□ 1.87
CPSF1-214ENST00000622776 CES5AQ6NT32 575 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 ZBTB33Q86T24 672 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 DAGLBQ8NCG7 672 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 RSPH1Q8WYR4 309 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 ADAM7Q9H2U9 754 aa26.71■■□□□ 1.87
CPSF1-214ENST00000622776 ZC3H11AO75152 810 aaKnown RBP eCLIP26.7■■□□□ 1.86
CPSF1-214ENST00000622776 CA8P35219 290 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 ITIH3Q06033 890 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 NPY5RQ15761 445 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 RHPN2Q8IUC4 686 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 VPS52Q8N1B4 723 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 LPPQ93052 612 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 NECTIN4Q96NY8 510 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 PHOX2BQ99453 314 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 TSHZ2Q9NRE2 1034 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 PIN4Q9Y237 131 aaKnown RBP26.7■■□□□ 1.86
CPSF1-214ENST00000622776 NR2E1Q9Y466 385 aa26.7■■□□□ 1.86
CPSF1-214ENST00000622776 SKIP12755 728 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 PSMC5P62195 406 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 LONRF3Q496Y0 759 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 GALNT17Q6IS24 598 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 GLB1LQ6UWU2 654 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 ANO5Q75V66 913 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 TMEM173Q86WV6 379 aaPredicted RBP26.69■■□□□ 1.86
CPSF1-214ENST00000622776 ZNF274Q96GC6 653 aaPredicted RBP26.69■■□□□ 1.86
CPSF1-214ENST00000622776 AIFM3Q96NN9 605 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 ZBP1Q9H171 429 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 POMKQ9H5K3 350 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 FAM105AQ9NUU6 356 aa26.69■■□□□ 1.86
CPSF1-214ENST00000622776 DDX25Q9UHL0 483 aaKnown RBP26.69■■□□□ 1.86
CPSF1-214ENST00000622776 VCPP55072 806 aaKnown RBP26.68■■□□□ 1.86
CPSF1-214ENST00000622776 TCF15Q12870 199 aa26.68■■□□□ 1.86
CPSF1-214ENST00000622776 NONOQ15233 471 aaKnown RBP eCLIP26.68■■□□□ 1.86
CPSF1-214ENST00000622776 CATSPER4Q7RTX7 472 aa26.68■■□□□ 1.86
CPSF1-214ENST00000622776 KSR1Q8IVT5 923 aa26.68■■□□□ 1.86
CPSF1-214ENST00000622776 FAM177A1Q8N128 213 aaPredicted RBP26.68■■□□□ 1.86
CPSF1-214ENST00000622776 JPH2Q9BR39 696 aaPredicted RBP26.68■■□□□ 1.86
CPSF1-214ENST00000622776 LARP6Q9BRS8 491 aaKnown RBP26.68■■□□□ 1.86
CPSF1-214ENST00000622776 NRDE2Q9H7Z3 1164 aa26.68■■□□□ 1.86
CPSF1-214ENST00000622776 TBC1D13Q9NVG8 400 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms