RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PRO3102Q9H379 93 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 PARVGQ9HBI0 331 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 SUCLA2Q9P2R7 463 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 COL4A3BPQ9Y5P4 624 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 PITPNM1O00562 1244 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 FAM13AO94988 1023 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 IDEP14735 1019 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 CSF2RAP15509 400 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 GAP43P17677 238 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 MXD4Q14582 209 aaPredicted RBP21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 NT5DC1Q5TFE4 455 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 RBM43Q6ZSC3 357 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 SCLYQ96I15 445 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 MAP7D2Q96T17 732 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 POLD4Q9HCU8 107 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 PANK4Q9NVE7 773 aa21.94■■□□□ 1.1
PDLIM2-221ENST00000622702 RPN1P04843 607 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 PLS3P13797 630 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 SARSP49591 514 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 EHHADHQ08426 723 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 NME8Q8N427 588 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 PRPF31Q8WWY3 499 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 SMARCE1Q969G3 411 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 GSDMAQ96QA5 445 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 KIAA1468Q9P260 1216 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 LARSQ9P2J5 1176 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 SEL1LQ9UBV2 794 aa21.93■■□□□ 1.1
PDLIM2-221ENST00000622702 SFI1A8K8P3 1242 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 ASAP2O43150 1006 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 CKBP12277 381 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 GLRA2P23416 452 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 EPHB4P54760 987 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 COASYQ13057 564 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 KCNB1Q14721 858 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 TRIM71Q2Q1W2 868 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 ZNF710Q8N1W2 664 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 ASAP3Q8TDY4 903 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 DNAJB3Q8WWF6 145 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 ERCC4Q92889 916 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 FAM49AQ9H0Q0 323 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 KCNG1Q9UIX4 513 aa21.92■■□□□ 1.1
PDLIM2-221ENST00000622702 MYH11P35749 1972 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 TANC1Q9C0D5 1861 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 IQCF3P0C7M6 154 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 THPOP40225 353 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 CDC42EP1Q00587 391 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 RBL2Q08999 1139 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 LAMTOR4Q0VGL1 99 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 PPIGQ13427 754 aaKnown RBP eCLIP21.91■■□□□ 1.11e-8■■■□□ 18.4
PDLIM2-221ENST00000622702 PPP2R5AQ15172 486 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 KMT5BQ4FZB7 885 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 MYCT1Q8N699 235 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 SPIRE2Q8WWL2 714 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 BSNDQ8WZ55 320 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 CCDC47Q96A33 483 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 IFT74Q96LB3 600 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 ZHX3Q9H4I2 956 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 OLFML3Q9NRN5 406 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 AKT3Q9Y243 479 aa21.91■■□□□ 1.1
PDLIM2-221ENST00000622702 RHOBTB3O94955 611 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 SELPP16109 830 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 NAMPTP43490 491 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 DMP1Q13316 513 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 HERC4Q5GLZ8 1057 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 ODR4Q5SWX8 454 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 LRRC8DQ7L1W4 858 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 RSPH3Q86UC2 560 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 SFR1Q86XK3 245 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 RHPN2Q8IUC4 686 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 NTPCRQ9BSD7 190 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 EXOC1Q9NV70 894 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 RMND1Q9NWS8 449 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 CAND2O75155 1236 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 VTNP04004 478 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 ACRP10323 421 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 MAPTP10636 758 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 NPTX2P47972 431 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 PEX3P56589 373 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 POU5F1BQ06416 359 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 CAPSQ13938 189 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 SCN5AQ14524 2016 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 ZNF618Q5T7W0 954 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 FIZ1Q96SL8 496 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 IL23AQ9NPF7 189 aa21.9■■□□□ 1.1
PDLIM2-221ENST00000622702 GPC3P51654 580 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 PSMD2Q13200 908 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 TFDP1Q14186 410 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 FAM26FQ5R3K3 315 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 C16orf59Q7L2K0 433 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 ZNF410Q86VK4 478 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 KSR1Q8IVT5 923 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 TDHQ8IZJ6 230 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 KCNN1Q92952 543 aa21.89■■□□□ 1.09
PDLIM2-221ENST00000622702 LAMA2P24043 3122 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 RFC2P35250 354 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 SMTNP53814 917 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 NCKAP1LP55160 1127 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 C9orf50Q5SZB4 431 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 DEFB128Q7Z7B8 93 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms