RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	TTLL13P	A6NNM8	815 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171		C9IYK1	514 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171		H3BNC9	293 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CAND2	O75155	1236 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PARN	O95453	639 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	EDN1	P05305	212 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	DARS	P14868	501 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	XBP1	P17861	261 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CYP3A7	P24462	503 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	YWHAB	P31946	246 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	SSTR3	P32745	418 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	BMPR1A	P36894	532 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	TEC	P42680	631 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	QARS	P47897	775 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	SARS	P49591	514 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	USP11	P51784	963 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CDR1	P51861	262 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CRYBB1	P53674	252 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	ERVFC1	P60507	584 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PSMC5	P62195	406 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CACNB1	Q02641	598 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	HYAL1	Q12794	435 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PPP2R5C	Q13362	524 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CAMK1	Q14012	370 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	DSC3	Q14574	896 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	TARBP2	Q15633	366 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	ECM1	Q16610	540 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	TPRN	Q4KMQ1	711 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	XKR3	Q5GH77	459 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	TTC38	Q5R3I4	469 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	B3GNT9	Q6UX72	402 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	FOXD4L3	Q6VB84	417 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	LRRC55	Q6ZSA7	311 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	GLYCTK	Q8IVS8	523 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	COLGALT1	Q8NBJ5	622 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	VN1R2	Q8NFZ6	395 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	MICAL1	Q8TDZ2	1067 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	HASPIN	Q8TF76	798 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PRPF31	Q8WWY3	499 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	BSND	Q8WZ55	320 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	HLA-C	Q95604	372 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	MRPL38	Q96DV4	380 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	B3GALT6	Q96L58	329 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	RIT2	Q99578	217 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	EIF2A	Q9BY44	585 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CXCL16	Q9H2A7	254 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	TTC12	Q9H892	705 aa	Predicted RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	ATP6V0A4	Q9HBG4	840 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	CYP26B1	Q9NR63	512 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	NRBP2	Q9NSY0	501 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	KLK14	Q9P0G3	267 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	DNAJB4	Q9UDY4	337 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	PCDHB6	Q9Y5E3	794 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	COL4A3BP	Q9Y5P4	624 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	COL4A3	Q01955	1670 aa		4.99	□□□□□ -1.61
LINC00649-219	ENST00000622171	KDM3A	Q9Y4C1	1321 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	VPS37C	A5D8V6	355 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	GRXCR2	A6NFK2	248 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	LRRIQ4	A6NIV6	560 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	HIDE1	A8MVS5	230 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	INO80B-WBP1	J3KQ70	363 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TNFRSF10A	O00220	468 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TULP1	O00294	542 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	C2CD2L	O14523	706 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	MAF	O75444	373 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	FGF18	O76093	207 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	SLITRK3	O94933	977 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	NPTXR	O95502	500 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	GLP2R	O95838	553 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	POMC	P01189	267 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	OR52Z1	P0C646	297 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	HARS	P12081	509 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	BMP1	P13497	986 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZSCAN20	P17040	1043 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	EIF4B	P23588	611 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	AKAP5	P24588	427 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TMOD1	P28289	359 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	GJB2	P29033	226 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	SFN	P31947	248 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CCT6A	P40227	531 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	NDUFV1	P49821	464 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	SLC26A2	P50443	739 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TOB1	P50616	345 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	GRIN1	Q05586	938 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	LAMTOR4	Q0VGL1	99 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CAPS	Q13938	189 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	DHX8	Q14562	1220 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	EPHA7	Q15375	998 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TMEM132A	Q24JP5	1023 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ERICH6B	Q5W0A0	696 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	FAM173B	Q6P4H8	233 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ECHDC2	Q86YB7	292 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CMTR2	Q8IYT2	770 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ABI1	Q8IZP0	508 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms