RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 ESPNB1AK53 854 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 GRK4P32298 578 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 EFNA5P52803 228 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 E2F4Q16254 413 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 MMS19Q96T76 1030 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 STX10O60499 249 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 ABI1Q8IZP0 508 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 RPF1Q9H9Y2 349 aaKnown RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 STARD7Q9NQZ5 370 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 ADAMTS5Q9UNA0 930 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 MYH4Q9Y623 1939 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 NFASCO94856 1347 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 ZSCAN30Q86W11 494 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 LENG9Q96B70 501 aa13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 PIN4Q9Y237 131 aaKnown RBP13.64□□□□□ -0.23
SCAMP1-207ENST00000621999 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 AFPP02771 609 aaKnown RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 TNNT1P13805 278 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 CYLC1P35663 651 aaPredicted RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 NPTX2P47972 431 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 GRIK4Q16099 956 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 NDST4Q9H3R1 872 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 USP20Q9Y2K6 914 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 MYH6P13533 1939 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 CD19P15391 556 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 ACOT2P49753 483 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 THPOP40225 353 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 MYL7Q01449 175 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 MFSD10Q14728 455 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 DBR1Q9UK59 544 aaKnown RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 DDX60LQ5H9U9 1706 aaKnown RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 GCLMP48507 274 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 BAG1Q99933 345 aaPredicted RBP13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
SCAMP1-207ENST00000621999 SMPD1P17405 629 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 MXI1P50539 228 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 SP2Q02086 613 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 GABRQQ9UN88 632 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 PDXKO00764 312 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 ASAP2O43150 1006 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 HMGCRP04035 888 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 PSEN2P49810 448 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 SLC12A3P55017 1021 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 GPR20Q99678 358 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 CNMDO75829 334 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 ARIH2O95376 493 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 GRB14Q14449 540 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 LMBRD2Q68DH5 695 aaPredicted RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 ANO5Q75V66 913 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 DHX40Q8IX18 779 aaKnown RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 IGSF9BQ9UPX0 1349 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 A0A087WZ62 844 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 LDHAP00338 332 aaKnown RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 PLCB4Q15147 1175 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 FDXACB1Q9BRP7 624 aaPredicted RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 NXF1Q9UBU9 619 aaKnown RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 DIS3Q9Y2L1 958 aaKnown RBP13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 NUB1Q9Y5A7 615 aa13.62□□□□□ -0.23
SCAMP1-207ENST00000621999 LAMA4Q16363 1823 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 CCDC112Q8NEF3 446 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 GUCY2CP25092 1073 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 ANKRD36BP1Q96IX9 119 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 C16orf45Q96MC5 204 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms