RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 GTF2BQ00403 316 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 SPIRE2Q8WWL2 714 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 PRPF31Q8WWY3 499 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 MRFAP1L1Q96HT8 127 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 IFT74Q96LB3 600 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 VPS16Q9H269 839 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 TYW1Q9NV66 732 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 LIMA1Q9UHB6 759 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 TRAF3IP3Q9Y228 551 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 DNAH12Q6ZR08 3092 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 DENND3A2RUS2 1198 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 PDXKO00764 312 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 HMGCRP04035 888 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 KLRC1P26715 233 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 C1QTNF8P60827 252 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 CAPSQ13938 189 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 KIAA0753Q2KHM9 967 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 ZNF484Q5JVG2 852 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 EFCAB12Q6NXP0 572 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 METTL13Q8N6R0 699 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 NOC3LQ8WTT2 800 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 ST6GALNAC4Q9H4F1 302 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 USP20Q9Y2K6 914 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 UBE4BO95155 1302 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 KAT6AQ92794 2004 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 BRCA2P51587 3418 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 LRRIQ4A6NIV6 560 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 TEX33O43247 280 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 SMTNP53814 917 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 PPFIA1Q13136 1202 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 GRIK4Q16099 956 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 TAS1R3Q7RTX0 852 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 SYCP3Q8IZU3 236 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 NTPCRQ9BSD7 190 aaKnown RBP20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 C17orf75Q9HAS0 396 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 SETD4Q9NVD3 440 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 PPME1Q9Y570 386 aa20.44■□□□□ 0.86
SEMA6C-210ENST00000621728 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 NR2F2P24468 414 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 COPB1P53618 953 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 GJA9P57773 515 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 FKBP3Q00688 224 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MAP2K1Q02750 393 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 HIC1Q14526 733 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MFSD10Q14728 455 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MARCH8Q5T0T0 291 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MAP3K21Q5TCX8 1036 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 DRC7Q8IY82 874 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 ACCSQ96QU6 501 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 AGPAT3Q9NRZ7 376 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 TBX20Q9UMR3 447 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 TRIM17Q9Y577 477 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 PTCH2Q9Y6C5 1203 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 SIP14410 1827 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 A0A1B0GTH6 734 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 CALUO43852 315 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 NR3C1P04150 777 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MYCNP04198 464 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 RARBP10826 455 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 PSEN2P49810 448 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 ADAM9Q13443 819 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 EDRF1Q3B7T1 1238 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 GNASQ5JWF2 1037 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 IER5Q5VY09 327 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 FOXR2Q6PJQ5 311 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 ZC3H3Q8IXZ2 948 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 BEGAINQ9BUH8 593 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 ARHGAP28Q9P2N2 729 aa20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 SUCLA2Q9P2R7 463 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 MAGEC2Q9UBF1 373 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-210ENST00000621728 GNRH1P01148 92 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 INHAP05111 366 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 SMIM10L2AP0DMW4 78 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 SMIM10L2BP0DMW5 78 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 EEF1GP26641 437 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 NAMPTP43490 491 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 CASP4P49662 377 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 PURAQ00577 322 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 SPAG1Q07617 926 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 LAMTOR4Q0VGL1 99 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 PPP4R3CPQ6ZMV5 832 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 PPP1R16BQ96T49 567 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 UPF3AQ9H1J1 476 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 XPNPEP3Q9NQH7 507 aa20.42■□□□□ 0.86
SEMA6C-210ENST00000621728 COL1A2P08123 1366 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 ANKRD63C9JTQ0 380 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 SRGAP2CP0DJJ0 459 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 MTIF2P46199 727 aaKnown RBP20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 ALCAMQ13740 583 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 NR1I3Q14994 352 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 BRDTQ58F21 947 aaPredicted RBP20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 RHPN2Q8IUC4 686 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 DEPTORQ8TB45 409 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 PXYLP1Q8TE99 480 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 LMBR1Q8WVP7 490 aa20.41■□□□□ 0.86
SEMA6C-210ENST00000621728 PSPC1Q8WXF1 523 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms