RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 ODR4Q5SWX8 454 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 GPBP1Q86WP2 473 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 KIFAP3Q92845 792 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 TIPINQ9BVW5 301 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 INO80BQ9C086 356 aaPredicted RBP20.59■□□□□ 0.89
CIRBP-245ENST00000621399 ST3GAL5Q9UNP4 418 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 EVPLQ92817 2033 aa20.59■□□□□ 0.89
CIRBP-245ENST00000621399 SCN5AQ14524 2016 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 RANBP2P49792 3224 aaKnown RBP20.58■□□□□ 0.89
CIRBP-245ENST00000621399 A0A1W2PPC1 479 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 HIP1RO75146 1068 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 CSDE1O75534 798 aaKnown RBP20.58■□□□□ 0.89
CIRBP-245ENST00000621399 CMA1P23946 247 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 PHKA2P46019 1235 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 CAPSQ13938 189 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 NAALADL2Q58DX5 795 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 SV2BQ7L1I2 683 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 FAM228AQ86W67 206 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 IQUBQ8NA54 791 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 DHX58Q96C10 678 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 IFT74Q96LB3 600 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 DRC1Q96MC2 740 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 IFT122Q9HBG6 1241 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 ERVK-5Q9HDB9 667 aa20.58■□□□□ 0.89
CIRBP-245ENST00000621399 CXXC1Q9P0U4 656 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-245ENST00000621399 ARID2Q68CP9 1835 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 NPHP3-ACAD11A0A0J9YXS1 232 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 EFCAB14O75071 495 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 KRT18P05783 430 aaKnown RBP20.57■□□□□ 0.88
CIRBP-245ENST00000621399 POU5F1BQ06416 359 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 ARSHQ5FYA8 562 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 SRGAP1Q7Z6B7 1085 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 KCNH3Q9ULD8 1083 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 SLC4A7Q9Y6M7 1214 aa20.57■□□□□ 0.88
CIRBP-245ENST00000621399 A0A1B0GVL5 298 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 LRRIQ4A6NIV6 560 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 POLR2DO15514 142 aaKnown RBP20.56■□□□□ 0.88
CIRBP-245ENST00000621399 FGFR4P22455 802 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 SFPQP23246 707 aaKnown RBP eCLIP20.56■□□□□ 0.88
CIRBP-245ENST00000621399 KCNJ6P48051 423 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
CIRBP-245ENST00000621399 PPP2R5AQ15172 486 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 E2F4Q16254 413 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 BSNDQ8WZ55 320 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 PYM1Q9BRP8 204 aaKnown RBP20.56■□□□□ 0.88
CIRBP-245ENST00000621399 FTHL17Q9BXU8 183 aa20.56■□□□□ 0.88
CIRBP-245ENST00000621399 A0A1W2PQ27 194 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 A0A1W2PQ64 194 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 A0A1W2PQD8 194 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 SFI1A8K8P3 1242 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 PFKFB1P16118 471 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 NAMPTP43490 491 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 PTENP60484 403 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 DAW1Q8N136 415 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 DEPTORQ8TB45 409 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 REEP2Q9BRK0 252 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 TMX1Q9H3N1 280 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 CUEDC2Q9H467 287 aa20.55■□□□□ 0.88
CIRBP-245ENST00000621399 INO80B-WBP1J3KQ70 363 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 PEX3P56589 373 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 WDR5P61964 334 aaKnown RBP20.54■□□□□ 0.88
CIRBP-245ENST00000621399 MAPK7Q13164 816 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 GIT2Q14161 759 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.54■□□□□ 0.88
CIRBP-245ENST00000621399 FAM43BQ6ZT52 329 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-245ENST00000621399 CATSPER4Q7RTX7 472 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 ZBTB8OSQ8IWT0 167 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 FSIP1Q8NA03 581 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 NFKBIZQ9BYH8 718 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 MINDY3Q9H8M7 445 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 C17orf75Q9HAS0 396 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 ODF2LQ9ULJ1 636 aa20.54■□□□□ 0.88
CIRBP-245ENST00000621399 DENND3A2RUS2 1198 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 CCDC169A6NNP5 214 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 ENPP3O14638 875 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 AMHP03971 560 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 DMP1Q13316 513 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-245ENST00000621399 DYMQ7RTS9 669 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 IFNLR1Q8IU57 520 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-245ENST00000621399 MRPS27Q92552 414 aaKnown RBP20.53■□□□□ 0.88
CIRBP-245ENST00000621399 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 C2orf40Q9H1Z8 148 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 ZHX3Q9H4I2 956 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 KCNG1Q9UIX4 513 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 HPSEQ9Y251 543 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 TET1Q8NFU7 2136 aa20.53■□□□□ 0.88
CIRBP-245ENST00000621399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 MYMKA6NI61 221 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 TBCAO75347 108 aaKnown RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 FAM13AO94988 1023 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 PLS3P13797 630 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 ATP2A2P16615 1042 aaKnown RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 ZSCAN20P17040 1043 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 NPTX2P47972 431 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 NDUFA8P51970 172 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 DEFB103AP81534 67 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms