RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 PSMC5P62195 406 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 LLGL1Q15334 1064 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 DENND2CQ68D51 928 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 LPAR1Q92633 364 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 CDHR1Q96JP9 859 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 TLR10Q9BXR5 811 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 FGFBP2Q9BYJ0 223 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 RNF146Q9NTX7 359 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 PRDM4Q9UKN5 801 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 ATP8A1Q9Y2Q0 1164 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 NOC2LQ9Y3T9 749 aaKnown RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 CEP83Q9Y592 693 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 WDR46O15213 610 aaKnown RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 SART1O43290 800 aaKnown RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 ATP2C2O75185 946 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 FTLP02792 175 aaPredicted RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 CIITAP33076 1130 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 DALRD3Q5D0E6 543 aaKnown RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF746Q6NUN9 644 aaPredicted RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 FOXR2Q6PJQ5 311 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF571Q7Z3V5 609 aaPredicted RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 DNAJC18Q9H819 358 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 PARP2Q9UGN5 583 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 USTQ9Y2C2 406 aa9.96□□□□□ -0.82
RBFOX1-223ENST00000620507 MYH15Q9Y2K3 1946 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ABCA3Q99758 1704 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 A0A1W2PRG0 241 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 DENND3A2RUS2 1198 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF263O14978 683 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PJA2O43164 708 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 NEFHP12036 1026 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 RFX1P22670 979 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SFNP31947 248 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 CARSP49589 748 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PLTPP55058 493 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 KCNA1Q09470 495 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ARSHQ5FYA8 562 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF365Q70YC5 407 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF720Q7Z2F6 126 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 CCDC77Q9BR77 488 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 RRP15Q9Y3B9 282 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 CACNA1SQ13698 1873 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 XIRP1Q702N8 1843 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ZBTB39O15060 712 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PSAPP07602 524 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 DR1Q01658 176 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 MTERF2Q49AM1 385 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SLC35G2Q8TBE7 412 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SLC7A3Q8WY07 619 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SLC35C1Q96A29 364 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SAAL1Q96ER3 474 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 KCTD10Q9H3F6 313 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 AZI2Q9H6S1 392 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PSD3Q9NYI0 1048 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ANKFY1Q9P2R3 1169 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 AMACRQ9UHK6 382 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 CCDC88AQ3V6T2 1871 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 MYO1FO00160 1098 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PPFIA4O75335 1185 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 NPM3O75607 178 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 CYP3A4P08684 503 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 NSFP46459 744 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 GPC5P78333 572 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF211Q13398 564 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 RPUSD2Q8IZ73 545 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 USP38Q8NB14 1042 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 FMO2Q99518 471 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 PLAAQ9Y263 795 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 IRS2Q9Y4H2 1338 aa9.95□□□□□ -0.82
RBFOX1-223ENST00000620507 GAS8O95995 478 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 ICAM1P05362 532 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 TRPC3Q13507 836 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 MTMR2Q13614 643 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 CCDC121Q6ZUS5 278 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 DNAAF5Q86Y56 855 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 GLG1Q92896 1179 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 RPAP3Q9H6T3 665 aaPredicted RBP9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 GABBR1Q9UBS5 961 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 UBE4BO95155 1302 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 SHANK3Q9BYB0 1731 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 ANKRD62A6NC57 917 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 MIF4GDA9UHW6 222 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 PLS3P13797 630 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 HSPA6P17066 643 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 DESP17661 470 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 NR1D1P20393 614 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 MUTP22033 750 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 ITIH3Q06033 890 aa9.94□□□□□ -0.82
RBFOX1-223ENST00000620507 SH3BP5LQ7L8J4 393 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms