RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ACER1Q8TDN7 264 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 PPP1R13LQ8WUF5 828 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 APPBP2Q92624 585 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 ACSF2Q96CM8 615 aaPredicted RBP8.94□□□□□ -0.98
CBWD1-228ENST00000619157 ARID3AQ99856 593 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.94□□□□□ -0.98
CBWD1-228ENST00000619157 ZNF552Q9H707 407 aaPredicted RBP8.94□□□□□ -0.98
CBWD1-228ENST00000619157 EBF1Q9UH73 591 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 CEP131Q9UPN4 1083 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 SLC4A4Q9Y6R1 1079 aa8.94□□□□□ -0.98
CBWD1-228ENST00000619157 ADAMTS20P59510 1910 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 BAZ2AQ9UIF9 1905 aaKnown RBP8.93□□□□□ -0.98
CBWD1-228ENST00000619157 GPAA1O43292 621 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 ASNSP08243 561 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 BACE1P56817 501 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 LACTBP83111 547 aaPredicted RBP8.93□□□□□ -0.98
CBWD1-228ENST00000619157 ZNF385BQ569K4 471 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 KIAA1755Q5JYT7 1200 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 ZSCAN25Q6NSZ9 544 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 CCDC129Q6ZRS4 1044 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 MCATQ8IVS2 390 aaKnown RBP8.93□□□□□ -0.98
CBWD1-228ENST00000619157 GPATCH3Q96I76 525 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
CBWD1-228ENST00000619157 ATP8A2Q9NTI2 1148 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 AGTPBP1Q9UPW5 1226 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
CBWD1-228ENST00000619157 TNRC18O15417 2968 aaPredicted RBP8.92□□□□□ -0.98
CBWD1-228ENST00000619157 ROBO3Q96MS0 1386 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 A0A1W2PRG0 241 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 ERC2O15083 957 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 PSPNO60542 156 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 AKR1B1P15121 316 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 SYN1P17600 705 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 SEPT2Q15019 361 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 NR0B2Q15466 257 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 CERKLQ49MI3 558 aaPredicted RBP8.92□□□□□ -0.98
CBWD1-228ENST00000619157 VPS53Q5VIR6 699 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 FBXO46Q6PJ61 603 aaPredicted RBP8.92□□□□□ -0.98
CBWD1-228ENST00000619157 C16orf86Q6ZW13 317 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 FASTKD5Q7L8L6 764 aaKnown RBP8.92□□□□□ -0.98
CBWD1-228ENST00000619157 DHX38Q92620 1227 aaKnown RBP8.92□□□□□ -0.98
CBWD1-228ENST00000619157 FSD1Q9BTV5 496 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 SLC45A1Q9Y2W3 748 aa8.92□□□□□ -0.98
CBWD1-228ENST00000619157 A0A0D9SFI3 127 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 CCDC85CA6NKD9 419 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 UPK3BL1B0FP48 263 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 UPK3BL2E5RIL1 263 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 RFXAPO00287 272 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 ZFYP08048 801 aaPredicted RBP8.91□□□□□ -0.98
CBWD1-228ENST00000619157 PI3P19957 117 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 RPS26P62854 115 aaKnown RBP8.91□□□□□ -0.98
CBWD1-228ENST00000619157 ABCB5Q2M3G0 1257 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 SBK1Q52WX2 424 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 FAM227BQ96M60 508 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
CBWD1-228ENST00000619157 ASCC2Q9H1I8 757 aaPredicted RBP8.91□□□□□ -0.98
CBWD1-228ENST00000619157 TXNRD2Q9NNW7 524 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 GINM1Q9NU53 330 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 KCNH3Q9ULD8 1083 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 GNEQ9Y223 722 aaKnown RBP8.91□□□□□ -0.98
CBWD1-228ENST00000619157 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
CBWD1-228ENST00000619157 GREB1LQ9C091 1923 aaPredicted RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 GSPT1P15170 499 aaKnown RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 HOXA7P31268 230 aaPredicted RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 PDE4BQ07343 736 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 RAB3GAP1Q15042 981 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 ZYXQ15942 572 aaKnown RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 PKN2Q16513 984 aaKnown RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 ZNF589Q86UQ0 364 aaPredicted RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 IFNL3Q8IZI9 196 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 EVI5LQ96CN4 794 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 C12orf42Q96LP6 360 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 P2RX7Q99572 595 aaKnown RBP8.9□□□□□ -0.98
CBWD1-228ENST00000619157 KIAA1683Q9H0B3 1180 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 IL25Q9H293 177 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 AS3MTQ9HBK9 375 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 SWAP70Q9UH65 585 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 PTCH2Q9Y6C5 1203 aa8.9□□□□□ -0.98
CBWD1-228ENST00000619157 C19orf81C9J6K1 198 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 CNMDO75829 334 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 VCAM1P19320 739 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 PSMC4P43686 418 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 LIG3P49916 1009 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 SOX10P56693 466 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 NMIQ13287 307 aaPredicted RBP8.89□□□□□ -0.99
CBWD1-228ENST00000619157 ADGRF1Q5T601 910 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 AGMOQ6ZNB7 445 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 CYB5D2Q8WUJ1 264 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 SHISA4Q96DD7 197 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 INCENPQ9NQS7 918 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 RBPJLQ9UBG7 517 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 ARPP21Q9UBL0 812 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms