RNA–Protein interactions for RNA: ENST00000619101.4

REST-208, Transcript of RE1 silencing transcription factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene REST, Length 7,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
REST-208	ENST00000619101	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	AEN	Q8WTP8	325 aa	Known RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	TGS1	Q96RS0	853 aa	Known RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	FAM129A	Q9BZQ8	928 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	ETNK1	Q9HBU6	452 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	CNOT8	Q9UFF9	292 aa	Known RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101		A0A087X0B3	334 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	RASA4B	C9J798	803 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	RASA4	O43374	803 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	P4HA1	P13674	534 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	ARL1	P40616	181 aa	Predicted RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	ZNF543	Q08ER8	600 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	RCSD1	Q6JBY9	416 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	CENPU	Q71F23	418 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	FAM160B2	Q86V87	743 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	MYCBPAP	Q8TBZ2	947 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	KMT5A	Q9NQR1	393 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	MAD2L2	Q9UI95	211 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	TESPA1	A2RU30	521 aa	Predicted RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	KRT19	P08727	400 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	PIGO	Q8TEQ8	1089 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	SUGT1	Q9Y2Z0	365 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	CC2D2B	Q6DHV5	1058 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.74	□□□□□ -0.21
REST-208	ENST00000619101	SPICE1	Q8N0Z3	855 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	MKNK1	Q9BUB5	465 aa		13.74	□□□□□ -0.21
REST-208	ENST00000619101	MAP3K7	O43318	606 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	SORBS3	O60504	671 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	BRAF	P15056	766 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	RPUSD2	Q8IZ73	545 aa	Known RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	DDX23	Q9BUQ8	820 aa	Known RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	PCDHB4	Q9Y5E5	795 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	HSPA9	P38646	679 aa	Known RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	ARHGEF16	Q5VV41	709 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	CARD9	Q9H257	536 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	CACNA1F	O60840	1977 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	SIGLEC1	Q9BZZ2	1709 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	TCP11X1	B4DZS4	312 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	ACTN1	P12814	892 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	PPP4C	P60510	307 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	KLHDC7A	Q5VTJ3	777 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	TCHH	Q07283	1943 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	KNDC1	Q76NI1	1749 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	PHF2	O75151	1096 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	HSD17B3	P37058	310 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	BRDT	Q58F21	947 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	CASKIN2	Q8WXE0	1202 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	GPR101	Q96P66	508 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	AGPAT1	Q99943	283 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	GRB10	Q13322	594 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	ZC3H18	Q86VM9	953 aa	Known RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	PPP4R1	Q8TF05	950 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.73	□□□□□ -0.21
REST-208	ENST00000619101	BATF3	Q9NR55	127 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	KCNQ4	P56696	695 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	DYNLT1	P63172	113 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	MDM1	Q8TC05	714 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	JDP2	Q8WYK2	163 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	ERP44	Q9BS26	406 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	HEMGN	Q9BXL5	484 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	TUFT1	Q9NNX1	390 aa		13.73	□□□□□ -0.21
REST-208	ENST00000619101	KRT1	P04264	644 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	RBM41	Q96IZ5	413 aa	Known RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	YY1AP1	Q9H869	796 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	ANAPC7	Q9UJX3	599 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101		A0A0G2JND7	137 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	DIAPH2	O60879	1101 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	MAP7D3	Q8IWC1	876 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	ACTRT1	Q8TDG2	376 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	CELF4	Q9BZC1	486 aa	Known RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	SEMA6B	Q9H3T3	888 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	PJA2	O43164	708 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	PBX1	P40424	430 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	STAT3	P40763	770 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	VAMP7	P51809	220 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	COG7	P83436	770 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	SKOR1	P84550	965 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	SLC35G2	Q8TBE7	412 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	SGSM3	Q96HU1	749 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	CSRNP1	Q96S65	589 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	PPP1R9A	Q9ULJ8	1098 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	ARL2BP	Q9Y2Y0	163 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	MT-ND3	P03897	115 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	ESRRA	P11474	423 aa	Predicted RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	TPD52	P55327	224 aa	Predicted RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	NPEPPS	P55786	919 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	EARS2	Q5JPH6	523 aa	Known RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	EIF1AD	Q8N9N8	165 aa	Known RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	SNF8	Q96H20	258 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	TMOD4	Q9NZQ9	345 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101	DBR1	Q9UK59	544 aa	Known RBP	13.72	□□□□□ -0.21
REST-208	ENST00000619101	ARHGAP23	Q9P227	1491 aa		13.72	□□□□□ -0.21
REST-208	ENST00000619101		A0A087X0T9	212 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms