RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 EMC2Q15006 297 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 CYP26C1Q6V0L0 522 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 ZNF397Q8NF99 534 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 NEK11Q8NG66 645 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 GOLGA5Q8TBA6 731 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 GPR20Q99678 358 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 KCNG1Q9UIX4 513 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 PHLPP2Q6ZVD8 1323 aa13.91□□□□□ -0.18
TNFAIP3-209ENST00000619035 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 EXOC3O60645 756 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 PSMC2P35998 433 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 ZBED6P86452 979 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 GTF2BQ00403 316 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 HSP90AA2PQ14568 343 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 NFIL3Q16649 462 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 GJC2Q5T442 439 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 WDR59Q6PJI9 974 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 SCFD2Q8WU76 684 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 SLC7A3Q8WY07 619 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 TMEM143Q96AN5 459 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 DNAJC7Q99615 494 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 PLXNA1Q9UIW2 1896 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 ZNF236Q9UL36 1845 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 DENND3A2RUS2 1198 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 AFPP02771 609 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 KCNMA1Q12791 1236 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 TMEM161BQ8NDZ6 487 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 IFT74Q96LB3 600 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 L2HGDHQ9H9P8 463 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 NRBP2Q9NSY0 501 aa13.9□□□□□ -0.18
TNFAIP3-209ENST00000619035 CASQ1P31415 396 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 APBA1Q02410 837 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 FIGNQ5HY92 759 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 MSL3Q8N5Y2 521 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 AFAP1L1Q8TED9 768 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 A0A1W2PQJ5 194 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC10A3P09131 477 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 SCP2P22307 547 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 ABCD1P33897 745 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 RTP1P59025 263 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 GRM1Q13255 1194 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 IRF5Q13568 498 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 GRB14Q14449 540 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 ELF2Q15723 593 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 MAMDC4Q6UXC1 1216 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC35C1Q96A29 364 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 VTA1Q9NP79 307 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
TNFAIP3-209ENST00000619035 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 PPP2R3AQ06190 1150 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 RRAGAQ7L523 313 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 TMEM174Q8WUU8 243 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 NIFKQ9BYG3 293 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 ADCYAP1R1P41586 468 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 MYBPC2Q14324 1141 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 SMC1BQ8NDV3 1235 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 MKNK1Q9BUB5 465 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP3-209ENST00000619035 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 LRRIQ4A6NIV6 560 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 LRRC53A6NM62 1247 aa13.87□□□□□ -0.19
TNFAIP3-209ENST00000619035 NDUFA10O95299 355 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms