RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PLA2G4DQ86XP0 818 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 APOL4Q9BPW4 351 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ZNF212Q9UDV6 495 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ANGPT2O15123 496 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 RASGRF1Q13972 1273 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 TUBA3EQ6PEY2 450 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 EXOSC4Q9NPD3 245 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 PPP6R2O75170 966 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 KLHL2O95198 593 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 AGTP01019 485 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ERFP50548 548 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SOS2Q07890 1332 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 NQO1P15559 274 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 YARSP54577 528 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 DYNLT1P63172 113 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SLC39A2Q9NP94 309 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 CBFA2T3O75081 653 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 MTO1Q9Y2Z2 717 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 PNMA8CA0A1B0GUJ8 204 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SAC3D1A6NKF1 404 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ADCY7P51828 1080 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 IMPG1Q17R60 797 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 TSHZ1Q6ZSZ6 1077 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 STX12Q86Y82 276 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SUN5Q8TC36 379 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 HMG20AQ9NP66 347 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ABHD10Q9NUJ1 306 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SH3GLB1Q9Y371 365 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 KDRP35968 1356 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 CLASP2O75122 1294 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 TUBA1BP68363 451 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 ITIH4Q14624 930 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 KRT72Q14CN4 511 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 TUBA1AQ71U36 451 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 BTN2A2Q8WVV5 523 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 RANBP17Q9H2T7 1088 aaKnown RBP15.94■□□□□ 0.14
COL5A1-208ENST00000618395 VPS54Q9P1Q0 977 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 SCRN3Q0VDG4 424 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 RHOT2Q8IXI1 618 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 MDM1Q8TC05 714 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 SERPINB13Q9UIV8 391 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 TMA16Q96EY4 203 aaKnown RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 UBN1Q9NPG3 1134 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 LRCH1Q9Y2L9 728 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 POGZQ7Z3K3 1410 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 FOXP2O15409 715 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 MYL1P05976 194 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 ABCE1P61221 599 aaKnown RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 NAA30Q147X3 362 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 SLC13A1Q9BZW2 595 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 PHF20L1A8MW92 1017 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 PGM3O95394 542 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 ZNF658Q5TYW1 1059 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 RBBP8NLQ8NC74 664 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 GORASP1Q9BQQ3 440 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 IARS2Q9NSE4 1012 aaKnown RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 HPCAL4Q9UM19 191 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 PCDHA5Q9Y5H7 936 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 COG2Q14746 738 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 SUPT20HQ8NEM7 779 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 AGBL2Q5U5Z8 902 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 LRIG3Q6UXM1 1119 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 CCDC81Q6ZN84 652 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 DDX18Q9NVP1 670 aaKnown RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 AP1S2P56377 157 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 C11orf88Q6PI97 169 aa15.93■□□□□ 0.14
COL5A1-208ENST00000618395 CCDC59Q9P031 241 aaKnown RBP15.93■□□□□ 0.14
COL5A1-208ENST00000618395 CACNA2D1P54289 1103 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 TMEM165Q9HC07 324 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 POLR3EQ9NVU0 708 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 RGS21Q2M5E4 152 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 MDH1BQ5I0G3 518 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 AARS2Q5JTZ9 985 aaKnown RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 RYBPQ8N488 228 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 ADAM30Q9UKF2 790 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 TRAPPC10P48553 1259 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 SYCP2LQ5T4T6 812 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 UBASH3BQ8TF42 649 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 LBHD1Q9BQE6 289 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 CALN1Q9BXU9 219 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 BSDC1Q9NW68 430 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 NAIPQ13075 1403 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 ATXN3P54252 364 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 LARP4BQ92615 738 aaKnown RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 NSL1Q96IY1 281 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 LRRN2O75325 713 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 PRLP01236 227 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 PDZK1Q5T2W1 519 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 KCNB1Q14721 858 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 RRM2BQ7LG56 351 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 PCYOX1LQ8NBM8 494 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 SEL1LQ9UBV2 794 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms