RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GLRA2P23416 452 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 ZNF75DP51815 510 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 CDC42EP1Q00587 391 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 MAP4K3Q8IVH8 894 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 ANP32BQ92688 251 aaKnown RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 TSEN34Q9BSV6 310 aaKnown RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 DDX20Q9UHI6 824 aaKnown RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 TGFB1I1O43294 461 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 INSRRP14616 1297 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 NMT1P30419 496 aaKnown RBP12.92□□□□□ -0.34
PDPN-211ENST00000617617 PSEN2P49810 448 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
PDPN-211ENST00000617617 MKNK1Q9BUB5 465 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 SAMSN1Q9NSI8 373 aaKnown RBP12.92□□□□□ -0.34
PDPN-211ENST00000617617 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 ANK1P16157 1881 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 SFI1A8K8P3 1242 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 K7ENM7 598 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 RPLP2P05387 115 aaKnown RBP12.92□□□□□ -0.34
PDPN-211ENST00000617617 PTGS1P23219 599 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 FANCCQ00597 558 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 MFSD10Q14728 455 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 LRRC41Q15345 812 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 CSGALNACT2Q8N6G5 542 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 CCDC113Q9H0I3 377 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 KMT5AQ9NQR1 393 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 TBX20Q9UMR3 447 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 MAPK8IP1Q9UQF2 711 aa12.92□□□□□ -0.34
PDPN-211ENST00000617617 CABYRO75952 493 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 EFNA5P52803 228 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 PEX3P56589 373 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 TRIM32Q13049 653 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 GRIK4Q16099 956 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 ASAP3Q8TDY4 903 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 ZHX3Q9H4I2 956 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 TBC1D7Q9P0N9 293 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 STX17P56962 302 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 PTPN11Q06124 597 aaPredicted RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
PDPN-211ENST00000617617 PSPC1Q8WXF1 523 aaKnown RBP12.91□□□□□ -0.34
PDPN-211ENST00000617617 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 KCNJ18B7U540 433 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 PRPF6O94906 941 aaKnown RBP12.9□□□□□ -0.34
PDPN-211ENST00000617617 ADCY5O95622 1261 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 ELNP15502 786 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 MARK3P27448 753 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 GRK4P32298 578 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 DNM2P50570 870 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 TFDP1Q14186 410 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 KCNJ12Q14500 433 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
PDPN-211ENST00000617617 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
PDPN-211ENST00000617617 GBP3Q9H0R5 595 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
PDPN-211ENST00000617617 CAPN2P17655 700 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 LAMTOR4Q0VGL1 99 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 CAPSQ13938 189 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 NR1I3Q14994 352 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDPN-211ENST00000617617 TPD52L1Q16890 204 aaPredicted RBP12.9□□□□□ -0.34
PDPN-211ENST00000617617 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 XPNPEP3Q9NQH7 507 aa12.9□□□□□ -0.34
PDPN-211ENST00000617617 INHAP05111 366 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 GNAT1P11488 350 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 KLRC1P26715 233 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 TMOD1P28289 359 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
PDPN-211ENST00000617617 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
PDPN-211ENST00000617617 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms