RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TIMP1P01033 207 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 RAG1P15918 1043 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 ITGB8P26012 769 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 ZNF131P52739 623 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 CRYBB1P53674 252 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 CCL23P55773 120 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 PNOCQ13519 176 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 CAPSQ13938 189 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 TFDP1Q14186 410 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 POSTNQ15063 836 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 CAMK4Q16566 473 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 TRAF7Q6Q0C0 670 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 LRRC8DQ7L1W4 858 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 CCDC65Q8IXS2 484 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 OSMRQ99650 979 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 PARVGQ9HBI0 331 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 HOOK1Q9UJC3 728 aaKnown RBP17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 ZMYND8Q9ULU4 1186 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-204ENST00000617222 LRRIQ4A6NIV6 560 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 RBAK-RBAKDNI3L0D1 243 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 MBD3O95983 291 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 MYL1P05976 194 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 IQCF3P0C7M6 154 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 GAP43P17677 238 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 NPTX2P47972 431 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 DMP1Q13316 513 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 PPP2R5AQ15172 486 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 HERC4Q5GLZ8 1057 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 UNC13DQ70J99 1090 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 ZNF410Q86VK4 478 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 ELOA2Q8IYF1 753 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 DEPTORQ8TB45 409 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 SCLYQ96I15 445 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 GCOM2Q9BZD3 368 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 C17orf75Q9HAS0 396 aa17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-204ENST00000617222 EVPLQ92817 2033 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 PVALEFA0A1B0GWK0 134 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 FRMD3A2A2Y4 597 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 SLC16A4O15374 487 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 SYN1P17600 705 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 PTMSP20962 102 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 NAMPTP43490 491 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 RGS19P49795 217 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 PTENP60484 403 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 DPYDQ12882 1025 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 COASYQ13057 564 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 MBTPS1Q14703 1052 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 SFR1Q86XK3 245 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 SPIRE2Q8WWL2 714 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 CLSTN2Q9H4D0 955 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 KMT5AQ9NQR1 393 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 TBC1D7Q9P0N9 293 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
PCDHGC3-204ENST00000617222 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 KLRC4O43908 158 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 TRAK2O60296 914 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 GHRP10912 638 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 DARSP14868 501 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 EIF4BP23588 611 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 PHKA2P46019 1235 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 SMTNP53814 917 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 POU5F1BQ06416 359 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 FAM178BQ8IXR5 827 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 KCNG1Q9UIX4 513 aa17.24■□□□□ 0.35
PCDHGC3-204ENST00000617222 SMC2O95347 1197 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 FGFR4P22455 802 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 LPIN1Q14693 890 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 GPNMBQ14956 572 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 KMT5BQ4FZB7 885 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 MFSD5Q6N075 450 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 ZBTB8OSQ8IWT0 167 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 BADQ92934 168 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 INO80BQ9C086 356 aaPredicted RBP17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 MINDY3Q9H8M7 445 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 MRPL44Q9H9J2 332 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 SEL1LQ9UBV2 794 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 NOC2LQ9Y3T9 749 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
PCDHGC3-204ENST00000617222 LOXHD1Q8IVV2 1947 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms