RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 NPEPPSP55786 919 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 DRP2Q13474 957 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 PCBP1Q15365 356 aaKnown RBP eCLIP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 CALCRLQ16602 461 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 EARS2Q5JPH6 523 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 DIS3L2Q8IYB7 885 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 EFHBQ8N7U6 833 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 ZNF668Q96K58 619 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 ZSCAN31Q96LW9 406 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 POP1Q99575 1024 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 SH2D3AQ9BRG2 576 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 FDXACB1Q9BRP7 624 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 LXNQ9BS40 222 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 MRPL9Q9BYD2 267 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 CWH43Q9H720 699 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 TLE6Q9H808 572 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 NGRNQ9NPE2 291 aaKnown RBP10.82□□□□□ -0.68
TARDBP-218ENST00000617172 TLR9Q9NR96 1032 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
TARDBP-218ENST00000617172 MYH9P35579 1960 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 BDP1A6H8Y1 2624 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 RALGAPA2Q2PPJ7 1873 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PI4K2BG5E9Z4 385 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 SLITRK3O94933 977 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 LYPLA2O95372 231 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 LARGE1O95461 756 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 EYA4O95677 639 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 XRCC6P12956 609 aaKnown RBP eCLIP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 ALADP13716 330 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 FGFR4P22455 802 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 IRS1P35568 1242 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PHKA2P46019 1235 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 NDUFV1P49821 464 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 SPIRE1Q08AE8 756 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 MXD4Q14582 209 aaPredicted RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 SMAD2Q15796 467 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 XKR9Q5GH70 373 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PLA2G4FQ68DD2 849 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 TWF2Q6IBS0 349 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 NCAPH2Q6IBW4 605 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 KCNT2Q6UVM3 1135 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 CATSPER4Q7RTX7 472 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 TPH2Q8IWU9 490 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 ADHFE1Q8IWW8 467 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PRPF31Q8WWY3 499 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 MRPS27Q92552 414 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PGBD4Q96DM1 585 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 NLRP4Q96MN2 994 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 HSD17B14Q9BPX1 270 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 SPG21Q9NZD8 308 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 RGL1Q9NZL6 768 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 CD207Q9UJ71 328 aa10.81□□□□□ -0.68
TARDBP-218ENST00000617172 PIN4Q9Y237 131 aaKnown RBP10.81□□□□□ -0.68
TARDBP-218ENST00000617172 MBTPS2O43462 519 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 NEMFO60524 1076 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 GPR37L1O60883 481 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 SEC24BO95487 1268 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 SRGAP2BP0DMP2 458 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 COL9A1P20849 921 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.687e-26■■■□□ 18.2
TARDBP-218ENST00000617172 TXKP42681 527 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 NRIP1P48552 1158 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 HMGN5P82970 282 aaKnown RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 POU5F1BQ06416 359 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 DLX2Q07687 328 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 LAMTOR4Q0VGL1 99 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 COASYQ13057 564 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 ORC2Q13416 577 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 SMAD4Q13485 552 aaKnown RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 TMEM31Q5JXX7 168 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 GLB1LQ6UWU2 654 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 KSR1Q8IVT5 923 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 DYDC2Q96IM9 177 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 EIF2AK1Q9BQI3 630 aaKnown RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 EPHX3Q9H6B9 360 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 CD320Q9NPF0 282 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 SH2B1Q9NRF2 756 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 FAM105AQ9NUU6 356 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
TARDBP-218ENST00000617172 WRAP73Q9P2S5 460 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-218ENST00000617172 EVPLQ92817 2033 aa10.79□□□□□ -0.68
TARDBP-218ENST00000617172 FAM205CA6NFA0 338 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms