RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
CBWD1-225ENST00000616944 ARHGAP28Q9P2N2 729 aa16.74■□□□□ 0.27
CBWD1-225ENST00000616944 K7ENM7 598 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 NAMPTP43490 491 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 STX17P56962 302 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 GTF2BQ00403 316 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 MTFR1Q15390 333 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 FBXO46Q6PJ61 603 aaPredicted RBP16.73■□□□□ 0.27
CBWD1-225ENST00000616944 PRPF31Q8WWY3 499 aaKnown RBP16.73■□□□□ 0.27
CBWD1-225ENST00000616944 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
CBWD1-225ENST00000616944 BECN2A8MW95 431 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 SLC16A4O15374 487 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
CBWD1-225ENST00000616944 KIF20AO95235 890 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 MRE11P49959 708 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 CLCN3P51790 818 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 CAPSQ13938 189 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 PPP2R5AQ15172 486 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 SPATA1Q5VX52 437 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 HAUS6Q7Z4H7 955 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 RETREG2Q8NC44 543 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 PSPC1Q8WXF1 523 aaKnown RBP16.72■□□□□ 0.27
CBWD1-225ENST00000616944 IFT74Q96LB3 600 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
CBWD1-225ENST00000616944 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
CBWD1-225ENST00000616944 KIFC3Q9BVG8 833 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 KMT5AQ9NQR1 393 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
CBWD1-225ENST00000616944 SMTNL1A8MU46 457 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 ZNF18P17022 549 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 SMTNP53814 917 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 MXD4Q14582 209 aaPredicted RBP16.71■□□□□ 0.27
CBWD1-225ENST00000616944 KNOP1Q1ED39 458 aaKnown RBP16.71■□□□□ 0.27
CBWD1-225ENST00000616944 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 NFRKBQ6P4R8 1299 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 SESTD1Q86VW0 696 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 MCOLN1Q9GZU1 580 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 KCNG1Q9UIX4 513 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
CBWD1-225ENST00000616944 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 MOXD2PA6NHM9 499 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CCL5P13501 91 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 SCP2P22307 547 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 ACLYP53396 1101 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 NBPF20Q3BBV1 942 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 METTL13Q8N6R0 699 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 ZNF333Q96JL9 665 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 SUCLA2Q9P2R7 463 aaPredicted RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 GOLGA6L19H0YKK7 550 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 PDXKO00764 312 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 TGFB1I1O43294 461 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CABYRO75952 493 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 GJB1P08034 283 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 DNM2P50570 870 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 MAP4K3Q8IVH8 894 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 ZC3H3Q8IXZ2 948 aaKnown RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 KIAA0319LQ8IZA0 1049 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 C7orf31Q8N865 590 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 ARMC5Q96C12 935 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
CBWD1-225ENST00000616944 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
CBWD1-225ENST00000616944 SMIM35A0A1B0GVV1 85 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 C17orf102A2RUQ5 167 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 DENND3A2RUS2 1198 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 H0YCG3 227 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 ASAP2O43150 1006 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 TREHO43280 583 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 TMOD1P28289 359 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 EDRF1Q3B7T1 1238 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 LRRC55Q6ZSA7 311 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 SAMSN1Q9NSI8 373 aaKnown RBP16.69■□□□□ 0.26
CBWD1-225ENST00000616944 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
CBWD1-225ENST00000616944 LRRIQ4A6NIV6 560 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms