RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 DACT1Q9NYF0 836 aa24.7■■□□□ 1.54
CBWD3-212ENST00000616550 EYSQ5T1H1 3165 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 LAD1O00515 517 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 RPA1P27694 616 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 GATMP50440 423 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 MXD4Q14582 209 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-212ENST00000616550 PTPROQ16827 1216 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 HAUS3Q68CZ6 603 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 FERMT3Q86UX7 667 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 IFT122Q9HBG6 1241 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 PRDM6Q9NQX0 595 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 LRWD1Q9UFC0 647 aa24.69■■□□□ 1.54
CBWD3-212ENST00000616550 MRPL42Q9Y6G3 142 aaKnown RBP24.69■■□□□ 1.54
CBWD3-212ENST00000616550 TBKBP1A7MCY6 615 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 C5orf67F2Z3F1 127 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 LINC00271P0C7V0 271 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 PDIA5Q14554 519 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 FAM102BQ5T8I3 360 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 CATSPER4Q7RTX7 472 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 SRGAP1Q7Z6B7 1085 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 C11orf84Q9BUA3 381 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-212ENST00000616550 XPNPEP1Q9NQW7 623 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.68■■□□□ 1.54
CBWD3-212ENST00000616550 STK24Q9Y6E0 443 aa24.68■■□□□ 1.54
CBWD3-212ENST00000616550 FNDC1Q4ZHG4 1894 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-212ENST00000616550 HOXA2O43364 376 aa24.67■■□□□ 1.54
CBWD3-212ENST00000616550 ECHDC2Q86YB7 292 aa24.67■■□□□ 1.54
CBWD3-212ENST00000616550 RNF149Q8NC42 400 aa24.67■■□□□ 1.54
CBWD3-212ENST00000616550 PLVAPQ9BX97 442 aa24.67■■□□□ 1.54
CBWD3-212ENST00000616550 DBR1Q9UK59 544 aaKnown RBP24.67■■□□□ 1.54
CBWD3-212ENST00000616550 A0A0U1RQF3 1178 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 FGFR1P11362 822 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 MUTP22033 750 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 CCT6AP40227 531 aaKnown RBP24.66■■□□□ 1.54
CBWD3-212ENST00000616550 PRPHP41219 470 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 TFDP1Q14186 410 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 TWF2Q6IBS0 349 aaKnown RBP24.66■■□□□ 1.54
CBWD3-212ENST00000616550 POTEGQ6S5H5 508 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 DTHD1Q6ZMT9 781 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 MRPL38Q96DV4 380 aaKnown RBP24.66■■□□□ 1.54
CBWD3-212ENST00000616550 THEGQ9P2T0 379 aa24.66■■□□□ 1.54
CBWD3-212ENST00000616550 PIN4Q9Y237 131 aaKnown RBP24.66■■□□□ 1.54
CBWD3-212ENST00000616550 USO1O60763 962 aaKnown RBP24.65■■□□□ 1.54
CBWD3-212ENST00000616550 EOMESO95936 686 aa24.65■■□□□ 1.54
CBWD3-212ENST00000616550 PDCP20941 246 aa24.65■■□□□ 1.54
CBWD3-212ENST00000616550 SPOUT1Q5T280 376 aaKnown RBP24.65■■□□□ 1.54
CBWD3-212ENST00000616550 ABI1Q8IZP0 508 aa24.65■■□□□ 1.54
CBWD3-212ENST00000616550 IGSF22Q8N9C0 903 aa24.65■■□□□ 1.54
CBWD3-212ENST00000616550 RNF169Q8NCN4 708 aa24.65■■□□□ 1.54
CBWD3-212ENST00000616550 PRUNE2Q8WUY3 3088 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 TRANK1O15050 2925 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 SKIP12755 728 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 PHKA2P46019 1235 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 ATXN2LQ8WWM7 1075 aaKnown RBP24.64■■□□□ 1.54
CBWD3-212ENST00000616550 TMEM117Q9H0C3 514 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 AAASQ9NRG9 546 aa24.64■■□□□ 1.54
CBWD3-212ENST00000616550 ARHGEF35A5YM69 484 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 ARL2P36404 184 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 POU5F1BQ06416 359 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 NAALADL2Q58DX5 795 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 KRT79Q5XKE5 535 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 MCPH1Q8NEM0 835 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 P2RX5Q93086 422 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 TRAIPQ9BWF2 469 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 POLR3FQ9H1D9 316 aaPredicted RBP24.63■■□□□ 1.53
CBWD3-212ENST00000616550 MINDY3Q9H8M7 445 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 AGPAT5Q9NUQ2 364 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 KIAA1671Q9BY89 1806 aa24.63■■□□□ 1.53
CBWD3-212ENST00000616550 PTENP60484 403 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 ATP2C1P98194 919 aaPredicted RBP24.62■■□□□ 1.53
CBWD3-212ENST00000616550 PCBP1Q15365 356 aaKnown RBP eCLIP24.62■■□□□ 1.53
CBWD3-212ENST00000616550 TIGD5Q53EQ6 642 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 PADI6Q6TGC4 694 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 MAEAQ7L5Y9 396 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 BRAPQ7Z569 592 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 ASAP3Q8TDY4 903 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 SNX29Q8TEQ0 813 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 INTS4Q96HW7 963 aaKnown RBP24.62■■□□□ 1.53
CBWD3-212ENST00000616550 LMAN2LQ9H0V9 348 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 TYW1Q9NV66 732 aaKnown RBP24.62■■□□□ 1.53
CBWD3-212ENST00000616550 PLAGL2Q9UPG8 496 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 KIAA1024Q9UPX6 916 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 PCDHB12Q9Y5F1 795 aa24.62■■□□□ 1.53
CBWD3-212ENST00000616550 VPS37CA5D8V6 355 aaPredicted RBP24.61■■□□□ 1.53
CBWD3-212ENST00000616550 K7ELQ4 463 aaPredicted RBP24.61■■□□□ 1.53
CBWD3-212ENST00000616550 GRM6O15303 877 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 ERLIN2O94905 339 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 GLRA2P23416 452 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 RAB27AP51159 221 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 MRPS5P82675 430 aaKnown RBP24.61■■□□□ 1.53
CBWD3-212ENST00000616550 IL17AQ16552 155 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 ZNF598Q86UK7 904 aaKnown RBP24.61■■□□□ 1.53
CBWD3-212ENST00000616550 CASD1Q96PB1 797 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 FAM105AQ9NUU6 356 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 RNF19AQ9NV58 838 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 COG5Q9UP83 839 aa24.61■■□□□ 1.53
CBWD3-212ENST00000616550 INO80B-WBP1J3KQ70 363 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 DLL1O00548 723 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 NCBP1Q09161 790 aaKnown RBP24.6■■□□□ 1.53
CBWD3-212ENST00000616550 CAPSQ13938 189 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms