RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZDHHC9Q9Y397 364 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 GIPC1O14908 333 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 CRCPO75575 148 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 CTDNEP1O95476 244 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 PHBP35232 272 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 ALKBH5Q6P6C2 394 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 FRMD5Q7Z6J6 570 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 RHOT2Q8IXI1 618 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 PALM2Q8IXS6 379 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 FAM76AQ8TAV0 307 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 MRRFQ96E11 262 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 POLR3CQ9BUI4 534 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 PASKQ96RG2 1323 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 KRT1P04264 644 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 NMT1P30419 496 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 PLCB1Q9NQ66 1216 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 SLC16A3O15427 465 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 ATF2P15336 505 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 HSPA6P17066 643 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 OAZ1P54368 228 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 HERVK_113P62684 666 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 MXRA7P84157 204 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 KRT12Q99456 494 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 SPATC1LQ9H0A9 340 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 RIOX1Q9H6W3 641 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 DDX4Q9NQI0 724 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNQ5Q9NR82 932 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 DONSONQ9NYP3 566 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 UBE4BO95155 1302 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 PDHXO00330 501 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 TRAPPC3O43617 180 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 MFAP3LO75121 409 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 SRGAP2BP0DMP2 458 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 TMEM270Q6UE05 265 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CLEC17AQ6ZS10 378 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CEP57Q86XR8 500 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 STRIP2Q9ULQ0 834 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 NDUFA10O95299 355 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 XPAP23025 273 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 SREBF1P36956 1147 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 GEN1Q17RS7 908 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 DENND2CQ68D51 928 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 TOGARAM2Q6ZUX3 1019 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 AFAP1L2Q8N4X5 818 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 LBHD1Q9BQE6 289 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 REEP2Q9BRK0 252 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 INTS2Q9H0H0 1204 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 PRMT7Q9NVM4 692 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 RPS6KA5O75582 802 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CALB1P05937 261 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CTSHP09668 335 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 TCF7P36402 384 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 ACTR2P61160 394 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF394Q53GI3 561 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CPLX4Q7Z7G2 160 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 FBXL13Q8NEE6 735 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 DNERQ8NFT8 737 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 FAM217BQ9NTX9 383 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 ADAM22Q9P0K1 906 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 SAMD15Q9P1V8 674 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 CPA4Q9UI42 421 aa10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-208ENST00000615606 GOLGA8FQ08AF8 430 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 GOLGA8DPQ0D2H9 430 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 SCN4BQ8IWT1 228 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 ATP2A3Q93084 1043 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 HVCN1Q96D96 273 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 IPO11Q9UI26 975 aaKnown RBP10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 PITPNM2Q9BZ72 1349 aa10.15□□□□□ -0.79
CLTCL1-208ENST00000615606 MCF2LO15068 1137 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 MSH4O15457 936 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 STRNO43815 780 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 KRT10P13645 584 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 MUTP22033 750 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 VPS41P49754 854 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SNRPFP62306 86 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 CTAGE3PQ8IX95 158 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 KCTD6Q8NC69 237 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SMC6Q96SB8 1091 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 TMEM60Q9H2L4 133 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SLITRK6Q9H5Y7 841 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 DAAM1Q9Y4D1 1078 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 KRT15P19012 456 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 PLA2G4FQ68DD2 849 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 EFCAB12Q6NXP0 572 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 ADAT2Q7Z6V5 191 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SLC35F6Q8N357 371 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 VPS18Q9P253 973 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 RNF14Q9UBS8 474 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SLC8A2Q9UPR5 921 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 NPHP3-ACAD11A0A0J9YXS1 232 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 NKRFO15226 690 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms