RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SMTNP53814 917 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 HUNKP57058 714 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IRX5P78411 483 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 KLHL30Q0D2K2 578 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PRAMEF19Q5SWL8 479 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 LDLRAD1Q5T700 205 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PDXDC1Q6P996 788 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 STXBP4Q6ZWJ1 553 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FRMD5Q7Z6J6 570 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DHX37Q8IY37 1157 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 METTL13Q8N6R0 699 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 POMGNT1Q8WZA1 660 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FAM212AQ96EL1 285 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CDHR1Q96JP9 859 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SPATA33Q96N06 139 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ACCSQ96QU6 501 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PCYT2Q99447 389 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IFIH1Q9BYX4 1025 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 HAUS4Q9H6D7 363 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ACP6Q9NPH0 428 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 HSPBP1Q9NZL4 362 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ANKFY1Q9P2R3 1169 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FBXO40Q9UH90 709 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CPA4Q9UI42 421 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DBR1Q9UK59 544 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 PNMA2Q9UL42 364 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PLAGL2Q9UPG8 496 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KCNH4Q9UQ05 1017 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DOCK5Q9H7D0 1870 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 EMSYQ7Z589 1322 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SYNGAP1Q96PV0 1343 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PHIPQ8WWQ0 1821 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TTLL13PA6NNM8 815 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SOCS7O14512 581 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DYNC1I1O14576 645 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 EIF3DO15371 548 aaKnown RBP eCLIP3.75□□□□□ -1.81
LIG4-205ENST00000614526 MAFGO15525 162 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SLC26A4O43511 780 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 STBD1O95210 358 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MOCS3O95396 460 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KRT13P13646 458 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ADORA2AP29274 412 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ADSSP30520 456 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CXCR5P32302 372 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MAGEA1P43355 309 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FMO5P49326 533 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MRPS25P82663 173 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 MAP2K1Q02750 393 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 PPP3CAQ08209 521 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 NCBP1Q09161 790 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 EMC2Q15006 297 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 BMT2Q1RMZ1 405 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TEX35Q5T0J7 233 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 GBP6Q6ZN66 633 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PAXIP1Q6ZW49 1069 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 DPP9Q86TI2 863 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SMAP1Q8IYB5 467 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 C2orf69Q8N8R5 385 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 RETREG2Q8NC44 543 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TMEM161BQ8NDZ6 487 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 GPRC5AQ8NFJ5 357 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DNERQ8NFT8 737 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PLEKHO2Q8TD55 490 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ASAP3Q8TDY4 903 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KAT5Q92993 513 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FGD4Q96M96 766 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IWS1Q96ST2 819 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PTPN18Q99952 460 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FAM213AQ9BRX8 229 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PACSIN1Q9BY11 444 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 GOLPH3Q9H4A6 298 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ANKEF1Q9NU02 776 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SEL1LQ9UBV2 794 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CHORDC1Q9UHD1 332 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 TBX20Q9UMR3 447 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TRPC6Q9Y210 931 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 GINS2Q9Y248 185 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MYPNQ86TC9 1320 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 A0A087X0T9 212 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KIF2AO00139 706 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 PPP1R37O75864 691 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 OATP04181 439 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ADRB2P07550 413 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FAM228BP0C875 321 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ADCYAP1R1P41586 468 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 RNASE9P60153 205 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 OSTNP61366 133 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PTK2Q05397 1052 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KIF5AQ12840 1032 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 BFSP1Q12934 665 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ASIC2Q16515 512 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MEA1Q16626 185 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SLC9C1Q4G0N8 1177 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 XKR3Q5GH77 459 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KLHDC7AQ5VTJ3 777 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CST9Q5W186 159 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SCARA3Q6AZY7 606 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IQCEQ6IPM2 695 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 XRRA1Q6P2D8 792 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ZBTB33Q86T24 672 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms