RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PIK3AP1Q6ZUJ8 805 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP38Q8NB14 1042 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SYN2Q92777 582 aaPredicted RBP23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 JMJD4Q9H9V9 463 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SEC63Q9UGP8 760 aaKnown RBP23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 PCDHGC5Q9Y5F6 944 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 LOC285556D6RIA3 1793 aa23.83■■□□□ 1.4
POLR2J3-220ENST00000613744 ZSCAN5CA6NGD5 496 aaPredicted RBP23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 SSBP05455 408 aaKnown RBP eCLIP23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 ITIH4Q14624 930 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 PFKFB3Q16875 520 aaPredicted RBP23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 PDXDC1Q6P996 788 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 CHURC1Q8WUH1 139 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 POLD4Q9HCU8 107 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 CCT8L1PA6NM43 557 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 RAD51CO43502 376 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 TAL1P17542 331 aaPredicted RBP23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 NAB2Q15742 525 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 MAN2A1Q16706 1144 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 CPLX4Q7Z7G2 160 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 ATG4CQ96DT6 458 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 CALR3Q96L12 384 aaKnown RBP23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 HOMER3Q9NSC5 361 aa23.82■■□□□ 1.4
POLR2J3-220ENST00000613744 CEP350Q5VT06 3117 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 PDHXO00330 501 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 LAD1O00515 517 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 CYP2C8P10632 490 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 CTNNA1P35221 906 aaKnown RBP23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 NLRP5P59047 1200 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 DTHD1Q6ZMT9 781 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 ANKS4BQ8N8V4 417 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 CCDC197Q8NCU1 140 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 BAP1Q92560 729 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 ASCC2Q9H1I8 757 aaPredicted RBP23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 NDST4Q9H3R1 872 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 RIOX1Q9H6W3 641 aa23.81■■□□□ 1.4
POLR2J3-220ENST00000613744 MANSC4A6NHS7 340 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 IGF2BP3O00425 579 aaKnown RBP eCLIP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 BUB1BO60566 1050 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 SARNPP82979 210 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 NAIF1Q69YI7 327 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 CCDC174Q6PII3 467 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 BTNL9Q6UXG8 535 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 P2RX7Q99572 595 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 PPP1R9AQ9ULJ8 1098 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 SLC12A4Q9UP95 1085 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 LRRC53A6NM62 1247 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 LIN7AO14910 233 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 ECHS1P30084 290 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 COG2Q14746 738 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 UAP1Q16222 522 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 FAM160B2Q86V87 743 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 CHMP6Q96FZ7 201 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 C7orf25Q9BPX7 421 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 MOV10L1Q9BXT6 1211 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 C15orf41Q9Y2V0 281 aa23.8■■□□□ 1.4
POLR2J3-220ENST00000613744 ASAP2O43150 1006 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 UBA7P41226 1012 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 VEGFBP49765 207 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 EIF3BP55884 814 aaKnown RBP23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 HLTFQ14527 1009 aaKnown RBP eCLIP23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 NBPF20Q3BBV1 942 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 ODF2Q5BJF6 829 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 FOXR2Q6PJQ5 311 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 PBKQ96KB5 322 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 BTNL10A8MVZ5 291 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 SMARCA1P28370 1054 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 PRPHP41219 470 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 CNNM4Q6P4Q7 775 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 RRAGAQ7L523 313 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 CACNA2D4Q7Z3S7 1137 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 CCDC63Q8NA47 563 aa23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 SPATS2LQ9NUQ6 558 aaKnown RBP23.79■■□□□ 1.4
POLR2J3-220ENST00000613744 SPDYE16A6NNV3 312 aaPredicted RBP23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 PALMO75781 387 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 DSG3P32926 999 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 ERVK-9P63128 1117 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 PDE4DQ08499 809 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 ERMARDQ5T6L9 678 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 CENPPQ6IPU0 288 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 CPXCR1Q8N123 301 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 SH3GL3Q99963 347 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 SH3GLB2Q9NR46 395 aa23.78■■□□□ 1.4
POLR2J3-220ENST00000613744 KLHL33A6NCF5 533 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 BUB1O43683 1085 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 QRICH1Q2TAL8 776 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 SLC9C1Q4G0N8 1177 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 CDCA2Q69YH5 1023 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 HIBCHQ6NVY1 386 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 POTEEQ6S8J3 1075 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 SCFD2Q8WU76 684 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 TAF4BQ92750 862 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 AK8Q96MA6 479 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 FAM129AQ9BZQ8 928 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 SLC24A3Q9HC58 644 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 RLFQ13129 1914 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 TESPA1A2RU30 521 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms