RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LAMB2P55268 1798 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 TCRBV7S2A1N4TA0A589 114 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 SORBS3O60504 671 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 NT5C2P49902 561 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 IFI35P80217 286 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-207ENST00000612273 VPS72Q15906 364 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 RUFY4Q6ZNE9 571 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
COL6A1-207ENST00000612273 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 MIGA2Q7L4E1 593 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 CCDC13Q8IYE1 715 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 CSRNP1Q96S65 589 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 NAV1Q8NEY1 1877 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 E2F5Q15329 346 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-207ENST00000612273 PPM1KQ8N3J5 372 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 ARFGAP2Q8N6H7 521 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 RUBCNQ92622 972 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 VAV3Q9UKW4 847 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 ALG6Q9Y672 507 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 K7ENM7 598 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 EYA4O95677 639 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 SSTR3P32745 418 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-207ENST00000612273 SLC29A2Q14542 456 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 MREGQ8N565 214 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 CCDC17Q96LX7 622 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 SEMA4AQ9H3S1 761 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 HAUS2Q9NVX0 235 aa15.21■□□□□ 0.03
COL6A1-207ENST00000612273 DBR1Q9UK59 544 aaKnown RBP15.21■□□□□ 0.03
COL6A1-207ENST00000612273 SYCE1Q8N0S2 351 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 RFFLQ8WZ73 363 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 AZI2Q9H6S1 392 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 AGPAT3Q9NRZ7 376 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 EMSYQ7Z589 1322 aa15.21■□□□□ 0.02
COL6A1-207ENST00000612273 VIMP08670 466 aaKnown RBP15.2■□□□□ 0.02
COL6A1-207ENST00000612273 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 DAB2IPQ5VWQ8 1189 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 ARHGEF19Q8IW93 802 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 CBWD1Q9BRT8 395 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 SUCLA2Q9P2R7 463 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-207ENST00000612273 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 DNM1LO00429 736 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 GJC1P36383 396 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 SREBF1P36956 1147 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 CDR1P51861 262 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 JAM2P57087 298 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 SP4Q02446 784 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 AP3B2Q13367 1082 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 MCTP2Q6DN12 878 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 SEC16BQ96JE7 1060 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 ZNF577Q9BSK1 485 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 MTFR1LQ9H019 292 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
COL6A1-207ENST00000612273 GOLGA6L10A0A0M3HER8 536 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 SPOPO43791 374 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 SETQ01105 290 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CDAN1Q8IWY9 1227 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 OSBPL7Q9BZF2 842 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CCDC188H7C350 402 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 HIP1RO75146 1068 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 PRKCIP41743 596 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 JAMLQ86YT9 394 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 SP8Q8IXZ3 490 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CACNA2D3Q8IZS8 1091 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 PSMD1Q99460 953 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 LXNQ9BS40 222 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 KIFC3Q9BVG8 833 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 APEX2Q9UBZ4 518 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 MYH4Q9Y623 1939 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 ACSL3O95573 720 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CHN1P15882 459 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CYP3A7P24462 503 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-207ENST00000612273 CERKQ8TCT0 537 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 USP20Q9Y2K6 914 aa15.19■□□□□ 0.02
COL6A1-207ENST00000612273 ZMYM2Q9UBW7 1377 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 LOC102724159A0A0B4J2E5 919 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 LMNB1P20700 586 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PWP2Q15269 919 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms