RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 TBX3O15119 743 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 CENPUQ71F23 418 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 MORC4Q8TE76 937 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 AGPAT1Q99943 283 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 ADPGKQ9BRR6 497 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 PITPNM3Q9BZ71 974 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 SAYSD1Q9NPB0 183 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 CPSF2Q9P2I0 782 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 SLC37A4O43826 429 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 MT-ND3P03897 115 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 CDK17Q00537 523 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 SRRM1Q8IYB3 904 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 ZNF473Q8WTR7 871 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 TUFT1Q9NNX1 390 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 WDR64B1ANS9 1081 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 K7ERI5 159 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 SLC26A4O43511 780 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 MYBP10242 640 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 EPHA7Q15375 998 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 KRT39Q6A163 491 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 TRIM51Q9BSJ1 452 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 CALN1Q9BXU9 219 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 TBC1D22BQ9NU19 505 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 PITPNM2Q9BZ72 1349 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 LSP1P33241 339 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
CDH1-212ENST00000611625 CAV1Q03135 178 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 TRIM59Q8IWR1 403 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 ANKRD36BP1Q96IX9 119 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 RAB21Q9UL25 225 aa13.33□□□□□ -0.28
CDH1-212ENST00000611625 RASA4BC9J798 803 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 RASA4O43374 803 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 GGPS1O95749 300 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 BAG2O95816 211 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 FMO5P49326 533 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 GEN1Q17RS7 908 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 FAM47EQ6ZV65 393 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 MCPH1Q8NEM0 835 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 SLC35G2Q8TBE7 412 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDH1-212ENST00000611625 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 DENND3A2RUS2 1198 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 BMP6P22004 513 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 APEX2Q9UBZ4 518 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
CDH1-212ENST00000611625 BYSLQ13895 437 aaKnown RBP13.32□□□□□ -0.28
CDH1-212ENST00000611625 PDIK1LQ8N165 341 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 OR2W6PQ8NHA6 318 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 PYROXD1Q8WU10 500 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 N4BP2L2Q92802 583 aaPredicted RBP13.32□□□□□ -0.28
CDH1-212ENST00000611625 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
CDH1-212ENST00000611625 DMGDHQ9UI17 866 aaKnown RBP13.32□□□□□ -0.28
CDH1-212ENST00000611625 SSX2IPQ9Y2D8 614 aa13.32□□□□□ -0.28
CDH1-212ENST00000611625 A0A087X0T9 212 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SASH3O75995 380 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 FAM228BP0C875 321 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 PLS3P13797 630 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 BRAFP15056 766 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 PRLRP16471 622 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 TFDP1Q14186 410 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SEPT14Q6ZU15 432 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 PROCA1Q8NCQ7 364 aaPredicted RBP13.31□□□□□ -0.28
CDH1-212ENST00000611625 INTS13Q9NVM9 706 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ZNF446Q9NWS9 450 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 CSADQ9Y600 493 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 WDR91A4D1P6 747 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ECE2O60344 883 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 TJP3O95049 919 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 NDUFB10O96000 172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms