RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, human

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH24-206	ENST00000610348	ALAS1	P13196	640 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	PLS3	P13797	630 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	RARRES1	P49788	294 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	CBWD6	Q4V339	395 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	CBWD3	Q5JTY5	395 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	CBWD5	Q5RIA9	395 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	U2AF1L4	Q8WU68	220 aa	Known RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	CALR3	Q96L12	384 aa	Known RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	GDAP1L1	Q96MZ0	367 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	IWS1	Q96ST2	819 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	FER1L6	Q2WGJ9	1857 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	KCNK3	O14649	394 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	MAPK13	O15264	365 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	CTNND1	O60716	968 aa	Known RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	ACTN2	P35609	894 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	ITGB3BP	Q13352	177 aa	Predicted RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	LEKR1	Q6ZMV7	388 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	IL31RA	Q8NI17	732 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	PACSIN2	Q9UNF0	486 aa	Predicted RBP	27.57	■■■□□ 2
CDH24-206	ENST00000610348	SAMM50	Q9Y512	469 aa		27.57	■■■□□ 2
CDH24-206	ENST00000610348	NCAN	O14594	1321 aa		27.56	■■■□□ 2
CDH24-206	ENST00000610348	OPA1	O60313	960 aa		27.56	■■■□□ 2
CDH24-206	ENST00000610348	EIF1AD	Q8N9N8	165 aa	Known RBP	27.56	■■■□□ 2
CDH24-206	ENST00000610348	CTDP1	Q9Y5B0	961 aa	Predicted RBP	27.56	■■■□□ 2
CDH24-206	ENST00000610348	AGPS	O00116	658 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	HEXIM1	O94992	359 aa	Known RBP	27.55	■■■□□ 2
CDH24-206	ENST00000610348	TMEM253	P0C7T8	217 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	CAPN2	P17655	700 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	DNA2	P51530	1060 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	PEX26	Q7Z412	305 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	CCDC43	Q96MW1	224 aa	Known RBP	27.55	■■■□□ 2
CDH24-206	ENST00000610348	RPS6KA5	O75582	802 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	TRIM49	P0CI25	452 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	TRIM49C	P0CI26	452 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	JAK3	P52333	1124 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	MRPS9	P82933	396 aa	Known RBP	27.55	■■■□□ 2
CDH24-206	ENST00000610348	C4orf19	Q8IY42	314 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	SYT11	Q9BT88	431 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	SPON1	Q9HCB6	807 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	PKD2L1	Q9P0L9	805 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	PPP1R9A	Q9ULJ8	1098 aa		27.55	■■■□□ 2
CDH24-206	ENST00000610348	SFN	P31947	248 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	ZNF280A	P59817	542 aa	Predicted RBP	27.54	■■■□□ 2
CDH24-206	ENST00000610348	CPXCR1	Q8N123	301 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	NLGN2	Q8NFZ4	835 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	LNX1	Q8TBB1	728 aa	Predicted RBP	27.54	■■■□□ 2
CDH24-206	ENST00000610348	JDP2	Q8WYK2	163 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	TEPSIN	Q96N21	525 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	KRT12	Q99456	494 aa		27.54	■■■□□ 2
CDH24-206	ENST00000610348	RAVER2	Q9HCJ3	691 aa	Known RBP	27.54	■■■□□ 2
CDH24-206	ENST00000610348	CWC15	Q9P013	229 aa	Known RBP	27.54	■■■□□ 2
CDH24-206	ENST00000610348	GOLGA8K	D6RF30	607 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	ZBED4	O75132	1171 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	GLI1	P08151	1106 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	GALC	P54803	685 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	HNRNPH2	P55795	449 aa	Known RBP	27.53	■■■□□ 2
CDH24-206	ENST00000610348	KIF22	Q14807	665 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	ZSCAN26	Q16670	478 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	XRRA1	Q6P2D8	792 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	GPR88	Q9GZN0	384 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	TCEAL9	Q9UHQ7	104 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	STXBP5L	Q9Y2K9	1186 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	PGRMC1	O00264	195 aa	Known RBP	27.53	■■■□□ 2
CDH24-206	ENST00000610348	HSF2BP	O75031	334 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	RPS12	P25398	132 aa	Known RBP	27.53	■■■□□ 2
CDH24-206	ENST00000610348	YWHAB	P31946	246 aa	Known RBP	27.53	■■■□□ 2
CDH24-206	ENST00000610348	GTF2B	Q00403	316 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	PGM5	Q15124	567 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	DALRD3	Q5D0E6	543 aa	Known RBP	27.53	■■■□□ 2
CDH24-206	ENST00000610348	SCFD2	Q8WU76	684 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	RFFL	Q8WZ73	363 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	SH3GL2	Q99962	352 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	EPB41L5	Q9HCM4	733 aa		27.53	■■■□□ 2
CDH24-206	ENST00000610348	VAMP7	P51809	220 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	PSMC5	P62195	406 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	KRT76	Q01546	638 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	GUCY2D	Q02846	1103 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	RDM1	Q8NG50	284 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	WHAMM	Q8TF30	809 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	RUFY1	Q96T51	708 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.52	■■■□□ 2
CDH24-206	ENST00000610348	ANKEF1	Q9NU02	776 aa		27.52	■■■□□ 2
CDH24-206	ENST00000610348	CCDC188	H7C350	402 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	PMM2	O15305	246 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	CEP104	O60308	925 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	IVL	P07476	585 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	RPS6	P62753	249 aa	Known RBP	27.51	■■■□□ 2
CDH24-206	ENST00000610348	PPFIA1	Q13136	1202 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	DAAM2	Q86T65	1068 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	GLYCTK	Q8IVS8	523 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	MREG	Q8N565	214 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	XXYLT1	Q8NBI6	393 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	OLIG1	Q8TAK6	271 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	LMO3	Q8TAP4	145 aa		27.51	■■■□□ 2
CDH24-206	ENST00000610348	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	27.51	■■■□□ 2
CDH24-206	ENST00000610348	DIS3	Q9Y2L1	958 aa	Known RBP	27.51	■■■□□ 2
CDH24-206	ENST00000610348	TNFAIP3	P21580	790 aa		27.51	■■□□□ 1.99
CDH24-206	ENST00000610348	MRPS25	P82663	173 aa	Known RBP	27.51	■■□□□ 1.99
CDH24-206	ENST00000610348	RASGEF1C	Q8N431	466 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms