RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 PSPC1Q8WXF1 523 aaKnown RBP15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 C7orf25Q9BPX7 421 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 NUP85Q9BW27 656 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 PNMA3Q9UL41 463 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 PDS5AQ29RF7 1337 aaKnown RBP15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 PDXKO00764 312 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 SRGAP2BP0DMP2 458 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 PDHBP11177 359 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 GRIN1Q05586 938 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 ASPHQ12797 758 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 CDC42EP5Q6NZY7 148 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 MICAL1Q8TDZ2 1067 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 SART1O43290 800 aaKnown RBP15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 TMEM60Q9H2L4 133 aa15.28■□□□□ 0.04
PCDHB16-201ENST00000609684 LPXNO60711 386 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 FAM133BQ5BKY9 247 aaKnown RBP15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 ARMCX2Q7L311 632 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 TRIM42Q8IWZ5 723 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 KLHL29Q96CT2 875 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 IPO11Q9UI26 975 aaKnown RBP15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 NR1I3Q14994 352 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 CFAP36Q96G28 342 aa15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 RBM41Q96IZ5 413 aaKnown RBP15.27■□□□□ 0.04
PCDHB16-201ENST00000609684 WDR91A4D1P6 747 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 MYMKA6NI61 221 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 SRGNP10124 158 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 KCNB2Q92953 911 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 ACAD9Q9H845 621 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 SAYSD1Q9NPB0 183 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 MAP2K2P36507 400 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 KCNJ6P48051 423 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 ZNF668Q96K58 619 aaPredicted RBP15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 TUFT1Q9NNX1 390 aa15.27■□□□□ 0.03
PCDHB16-201ENST00000609684 PFDN6O15212 129 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 GPC4O75487 556 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 PLS3P13797 630 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 SOX5P35711 763 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 SH2D4BQ5SQS7 431 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 PCDHA10Q9Y5I2 948 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 TADA3O75528 432 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 RNASELQ05823 741 aaKnown RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 MCUQ8NE86 351 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 AGPAT5Q9NUQ2 364 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 JCADQ9P266 1359 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 NFX1Q12986 1120 aaKnown RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 DCLK2Q8N568 766 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 SH2D3AQ9BRG2 576 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 RPAP3Q9H6T3 665 aaPredicted RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 GRID2IPA4D2P6 1211 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 EVI5O60447 810 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 PHKA2P46019 1235 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 TROAPQ12815 778 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 TC2NQ8N9U0 490 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
PCDHB16-201ENST00000609684 ITIH6Q6UXX5 1313 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 UBE2Q2LH0YL09 131 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 CALB1P05937 261 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 KLRK1P26718 216 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 IRX4P78413 519 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 PCGF5Q86SE9 256 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 BBS5Q8N3I7 341 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 REEP2Q9BRK0 252 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 RFX1P22670 979 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 GNA15P30679 374 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 HNRNPH2P55795 449 aaKnown RBP15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 SPATA4Q8NEY3 305 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 HDAC11Q96DB2 347 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 UBE4BO95155 1302 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 FDX1P10109 184 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 TBXAS1P24557 533 aaPredicted RBP15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 HMGCS2P54868 508 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 SALL3Q9BXA9 1300 aa15.25■□□□□ 0.03
PCDHB16-201ENST00000609684 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 GPC3P51654 580 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 DSTYKQ6XUX3 929 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 ARPP19P56211 112 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 MAP7Q14244 749 aa15.24■□□□□ 0.03
PCDHB16-201ENST00000609684 RAD9BQ6WBX8 426 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms