RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 PRR23BQ6ZRT6 265 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 METTL13Q8N6R0 699 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 ZBTB44Q8NCP5 570 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 PIDD1Q9HB75 910 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 WDR6Q9NNW5 1121 aaKnown RBP10.62□□□□□ -0.71
CTCFL-220ENST00000608858 MAN1C1Q9NR34 630 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 NUMBLQ9Y6R0 609 aa10.62□□□□□ -0.71
CTCFL-220ENST00000608858 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 PALM3A6NDB9 673 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 HOXA2O43364 376 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 CYTH3O43739 400 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 TBC1D4O60343 1298 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 RPLP2P05387 115 aaKnown RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 LAMP2P13473 410 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 CRYBB1P53674 252 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 ODR4Q5SWX8 454 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 PARM1Q6UWI2 310 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 GET4Q7L5D6 327 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 DDX53Q86TM3 631 aaKnown RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 SMG7Q92540 1137 aaKnown RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 LPPQ93052 612 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 SHDQ96IW2 340 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 RNF41Q9H4P4 317 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-220ENST00000608858 DCTPP1Q9H773 170 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 SEMA4GQ9NTN9 838 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 EPS15L1Q9UBC2 864 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 RAB23Q9ULC3 237 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 INPP5FQ9Y2H2 1132 aa10.61□□□□□ -0.71
CTCFL-220ENST00000608858 DENND4AQ7Z401 1863 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 INPPL1O15357 1258 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 LILRB5O75023 590 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 GPR32O75388 356 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 GALTP07902 379 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 PMLP29590 882 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 ACTR2P61160 394 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 MTMR1Q13613 665 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 CCDC178Q5BJE1 867 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
CTCFL-220ENST00000608858 TAS1R1Q7RTX1 841 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 PALB2Q86YC2 1186 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
CTCFL-220ENST00000608858 EMILIN2Q9BXX0 1053 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 NRDE2Q9H7Z3 1164 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 SLC9A2Q9UBY0 812 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
CTCFL-220ENST00000608858 CNOT1A5YKK6 2376 aaKnown RBP10.6□□□□□ -0.71
CTCFL-220ENST00000608858 CLUHO75153 1309 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 DDX39AO00148 427 aaKnown RBP10.59□□□□□ -0.71
CTCFL-220ENST00000608858 MEIS2O14770 477 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 SPINK2P20155 84 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 AK2P54819 239 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 NLRP11P59045 1033 aaKnown RBP10.59□□□□□ -0.71
CTCFL-220ENST00000608858 RNASELQ05823 741 aaKnown RBP10.59□□□□□ -0.71
CTCFL-220ENST00000608858 SRSF5Q13243 272 aaKnown RBP10.59□□□□□ -0.71
CTCFL-220ENST00000608858 HTR4Q13639 388 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 GIT2Q14161 759 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 CCDC6Q16204 474 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 IL31Q6EBC2 164 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 C15orf39Q6ZRI6 1047 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 PRR23CQ6ZRP0 262 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 PLPPR4Q7Z2D5 763 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 ZNF280BQ86YH2 543 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 STAMQ92783 540 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 FGF14Q92915 247 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 CUL5Q93034 780 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 NXPE3Q969Y0 559 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 GPRASP2Q96D09 838 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 MYL10Q9BUA6 226 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 RIOX1Q9H6W3 641 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 JPH1Q9HDC5 661 aaPredicted RBP10.59□□□□□ -0.71
CTCFL-220ENST00000608858 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 IRAK3Q9Y616 596 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 SPEGQ15772 3267 aa10.59□□□□□ -0.71
CTCFL-220ENST00000608858 FRMPD4Q14CM0 1322 aa10.58□□□□□ -0.71
CTCFL-220ENST00000608858 SOBPA7XYQ1 873 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 MEIS3P2A8K0S8 358 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 ANHXE9PGG2 379 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 BACH1O14867 736 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 MS4A1P11836 297 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 SLC11A1P49279 550 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 POLGP54098 1239 aaPredicted RBP10.58□□□□□ -0.72
CTCFL-220ENST00000608858 MTAPQ13126 283 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 MLF2Q15773 248 aaPredicted RBP10.58□□□□□ -0.72
CTCFL-220ENST00000608858 C20orf194Q5TEA3 1177 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 CKAP2LQ8IYA6 745 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 CDHR1Q96JP9 859 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 SENP2Q9HC62 589 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms