RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 CNOT6LQ96LI5 555 aaKnown RBP13.53□□□□□ -0.24
CTCFL-218ENST00000608440 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-218ENST00000608440 LARSQ9P2J5 1176 aaKnown RBP13.53□□□□□ -0.24
CTCFL-218ENST00000608440 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 IGKV5-2P06315 115 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 CD97P48960 835 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 CDK7P50613 346 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 TIMM10P62072 90 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 GIT2Q14161 759 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 KLC3Q6P597 504 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.24
CTCFL-218ENST00000608440 CEP70Q8NHQ1 597 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 SCFD2Q8WU76 684 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.24
CTCFL-218ENST00000608440 UTP11Q9Y3A2 253 aaKnown RBP13.52□□□□□ -0.24
CTCFL-218ENST00000608440 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 FAM196BA6NMK8 535 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 TBX10O75333 385 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 EARS2Q5JPH6 523 aaKnown RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 TRIM67Q6ZTA4 783 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 SATL1Q86VE3 508 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 FBXO41Q8TF61 875 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 SLC7A6OSQ96CW6 309 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
CTCFL-218ENST00000608440 ASCC2Q9H1I8 757 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 NOC2LQ9Y3T9 749 aaKnown RBP13.52□□□□□ -0.25
CTCFL-218ENST00000608440 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 LCA5LO95447 670 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 AGTP01019 485 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 PLTPP55058 493 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 RFX8Q6ZV50 586 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 CLIP3Q96DZ5 547 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 SLC4A9Q96Q91 983 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 FOXP1Q9H334 677 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 CUEDC2Q9H467 287 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 MYO5AQ9Y4I1 1855 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 B4E1Z4 1266 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 ASMTLO95671 621 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 BCRP11274 1271 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 HDAC4P56524 1084 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 IGBP1P78318 339 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 R3HDM1Q15032 1099 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 SMUG1Q53HV7 270 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 ADAT2Q7Z6V5 191 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 PABPC3Q9H361 631 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 TUT1Q9H6E5 874 aaKnown RBP13.51□□□□□ -0.25
CTCFL-218ENST00000608440 RASAL2Q9UJF2 1139 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 MROH7Q68CQ1 1323 aa13.51□□□□□ -0.25
CTCFL-218ENST00000608440 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 YY1P25490 414 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTCFL-218ENST00000608440 ARID5AQ03989 594 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 SLC34A1Q06495 639 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 MIIPQ5JXC2 388 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 C6orf118Q5T5N4 469 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 TEKT1Q969V4 418 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-218ENST00000608440 SEMA4AQ9H3S1 761 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 FGFR4P22455 802 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 MARK3P27448 753 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-218ENST00000608440 COPB2P35606 906 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 CCR3P51677 355 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 GPSM2P81274 684 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 RNF43Q68DV7 783 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 DEPTORQ8TB45 409 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 LRRC37BQ96QE4 947 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 CRAMP1Q96RY5 1269 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 NAP1L3Q99457 506 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-218ENST00000608440 KRT82Q9NSB4 513 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 CHKBQ9Y259 395 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 WASF2Q9Y6W5 498 aa13.5□□□□□ -0.25
CTCFL-218ENST00000608440 PGRMC1O00264 195 aaKnown RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PSMA7O14818 248 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 KCNQ2O43526 872 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms