RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
CTCFL-216ENST00000608263 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 SCFD1Q8WVM8 642 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
CTCFL-216ENST00000608263 CD248Q9HCU0 757 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
CTCFL-216ENST00000608263 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 PDE6CP51160 858 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 NBPF9Q3BBW0 867 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 SPATS2Q86XZ4 545 aaKnown RBP11.17□□□□□ -0.62
CTCFL-216ENST00000608263 C4orf32Q8N8J7 132 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 N4BP2L2Q92802 583 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-216ENST00000608263 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 SAAL1Q96ER3 474 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF148Q9UQR1 794 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 PASKQ96RG2 1323 aa11.17□□□□□ -0.62
CTCFL-216ENST00000608263 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 GRID2IPA4D2P6 1211 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 GUCY2CP25092 1073 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 MAPK4P31152 587 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 PCK1P35558 622 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 DDR1Q08345 913 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 KCNA1Q09470 495 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 TTMPQ5BVD1 217 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 SLC30A5Q8TAD4 765 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 FGFBP2Q9BYJ0 223 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 PMS2P54278 862 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 EPC2Q52LR7 807 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 HHATQ5VTY9 493 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 CAMTA1Q9Y6Y1 1673 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 RGPD1P0DJD0 1748 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 HNRNPDLO14979 420 aaKnown RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 AKAP3O75969 853 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 MARK3P27448 753 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.621e-6■■□□□ 14.4
CTCFL-216ENST00000608263 TMED2Q15363 201 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 C2CD6Q53TS8 623 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 MMTAG2Q9BU76 263 aaKnown RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 KLHL14Q9P2G3 628 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 TTC7AQ9ULT0 858 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-216ENST00000608263 EMSYQ7Z589 1322 aa11.16□□□□□ -0.62
CTCFL-216ENST00000608263 AFDNP55196 1824 aaKnown RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ZBTB39O15060 712 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ECEL1O95672 775 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 KRT19P08727 400 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ATF2P15336 505 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ATP11AP98196 1134 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 PTGISQ16647 500 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 C10orf76Q5T2E6 689 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF668Q96K58 619 aaPredicted RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 BCL9O00512 1426 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 SLC16A4O15374 487 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 CASP5P51878 434 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 DYNLT1P63172 113 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 CDC42EP5Q6NZY7 148 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 SRRM1Q8IYB3 904 aaKnown RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 DAGLBQ8NCG7 672 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 BTBD6Q96KE9 485 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 EDEM3Q9BZQ6 932 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 KLC4Q9NSK0 619 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ANKFY1Q9P2R3 1169 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ABCB11O95342 1321 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 GAP43P17677 238 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 USP11P51784 963 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 STRIP1Q5VSL9 837 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 TNS2Q63HR2 1409 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 CCDC137Q6PK04 289 aaKnown RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 RUSC1Q9BVN2 902 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 RTFDC1Q9BY42 306 aaPredicted RBP11.15□□□□□ -0.62
CTCFL-216ENST00000608263 PARP2Q9UGN5 583 aa11.15□□□□□ -0.62
CTCFL-216ENST00000608263 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
CTCFL-216ENST00000608263 DDNO94850 711 aaPredicted RBP11.14□□□□□ -0.63
CTCFL-216ENST00000608263 DESP17661 470 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms