RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 TAS2R14Q9NYV8 317 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 DMGDHQ9UI17 866 aaKnown RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 ODF2LQ9ULJ1 636 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 DENND3A2RUS2 1198 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 SPDYE16A6NNV3 312 aaPredicted RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 HARSP12081 509 aaKnown RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 CCND2P30279 289 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 PSMC5P62195 406 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 BFSP1Q12934 665 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 BEND6Q5SZJ8 279 aaPredicted RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 PHLDB3Q6NSJ2 640 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 STXBP4Q6ZWJ1 553 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 NCAPG2Q86XI2 1143 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 HSPBP1Q9NZL4 362 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 H3BQF6 201 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 KRT13P13646 458 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
CTSA-214ENST00000606788 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
CTSA-214ENST00000606788 ARHGEF19Q8IW93 802 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 BICD1Q96G01 975 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 OSGEPQ9NPF4 335 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 CYP39A1Q9NYL5 469 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 AIPL1Q9NZN9 384 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 NAGPAQ9UK23 515 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 DNAH12Q6ZR08 3092 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 DOCK5Q9H7D0 1870 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 CCDC151A5D8V7 595 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 ADRB2P07550 413 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 PLS3P13797 630 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 SLC20A1Q8WUM9 679 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 IQCDQ96DY2 449 aa17.31■□□□□ 0.36
CTSA-214ENST00000606788 RBM12Q9NTZ6 932 aaKnown RBP17.31■□□□□ 0.36
CTSA-214ENST00000606788 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 FOXN3O00409 490 aaPredicted RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 DDX3XO00571 662 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■■■ 33.6
CTSA-214ENST00000606788 BCRP11274 1271 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 MKRN3Q13064 507 aaKnown RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 RIN2Q8WYP3 895 aaPredicted RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 TEX13BQ9BXU2 312 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 KCNK3O14649 394 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 SLC26A4O43511 780 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 LCA5LO95447 670 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 PGK2P07205 417 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 NPTX2P47972 431 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 PHLDB2Q86SQ0 1253 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 APOBEC3FQ8IUX4 373 aaKnown RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
CTSA-214ENST00000606788 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 PCDHA10Q9Y5I2 948 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
CTSA-214ENST00000606788 GRID2IPA4D2P6 1211 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 MARK3P27448 753 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 SSTR3P32745 418 aaPredicted RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 STAT1P42224 750 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 KLHL7Q8IXQ5 586 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 PPM1KQ8N3J5 372 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 SPATA4Q8NEY3 305 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 ACCSQ96QU6 501 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 MOV10L1Q9BXT6 1211 aaKnown RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 EDEM3Q9BZQ6 932 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 ADGRA3Q8IWK6 1321 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 LRRIQ3A6PVS8 624 aaPredicted RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 VAMP7P51809 220 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 NAA35Q5VZE5 725 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 MSANTD4Q8NCY6 345 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 REPS2Q8NFH8 660 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 LNX1Q8TBB1 728 aaPredicted RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 ACAD9Q9H845 621 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 SEL1LQ9UBV2 794 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 F8VZ95 297 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 ACTR2P61160 394 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 PRKCEQ02156 737 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
CTSA-214ENST00000606788 NUCKS1Q9H1E3 243 aaKnown RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 JPH1Q9HDC5 661 aaPredicted RBP17.29■□□□□ 0.36
CTSA-214ENST00000606788 IRF6O14896 467 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
CTSA-214ENST00000606788 PPP1R37O75864 691 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 ADSSP30520 456 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 CKAP4Q07065 602 aaKnown RBP17.28■□□□□ 0.36
CTSA-214ENST00000606788 BRD3Q15059 726 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 TRADDQ15628 312 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 NAB2Q15742 525 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 AP1M1Q9BXS5 423 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms