RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 KCNK18Q7Z418 384 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 DBF4BQ8NFT6 615 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 VWCEQ96DN2 955 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 NLRP4Q96MN2 994 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 KAT6AQ92794 2004 aa15.83■□□□□ 0.12
CTSA-211ENST00000606066 A0A087WZ62 844 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 ZBBXA8MT70 800 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 SRGAP2CP0DJJ0 459 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
CTSA-211ENST00000606066 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
CTSA-211ENST00000606066 RAD54LQ92698 747 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 KIFAP3Q92845 792 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 FDXACB1Q9BRP7 624 aaPredicted RBP15.82■□□□□ 0.12
CTSA-211ENST00000606066 PYM1Q9BRP8 204 aaKnown RBP15.82■□□□□ 0.12
CTSA-211ENST00000606066 FTHL17Q9BXU8 183 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 PBX4Q9BYU1 374 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 POLR3FQ9H1D9 316 aaPredicted RBP15.82■□□□□ 0.12
CTSA-211ENST00000606066 CDHR5Q9HBB8 845 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 KCNG1Q9UIX4 513 aa15.82■□□□□ 0.12
CTSA-211ENST00000606066 DARSP14868 501 aaKnown RBP15.81■□□□□ 0.12
CTSA-211ENST00000606066 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 CD52P31358 61 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 STAT6P42226 847 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 KCNJ6P48051 423 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 SLC12A3P55017 1021 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 NFX1Q12986 1120 aaKnown RBP15.81■□□□□ 0.12
CTSA-211ENST00000606066 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 ADALQ6DHV7 355 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 C1orf186Q6ZWK4 172 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 KSR1Q8IVT5 923 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 RNF149Q8NC42 400 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 LARP4BQ92615 738 aaKnown RBP15.81■□□□□ 0.12
CTSA-211ENST00000606066 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 DRC1Q96MC2 740 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 AGO3Q9H9G7 860 aaKnown RBP15.81■□□□□ 0.12
CTSA-211ENST00000606066 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 NOC2LQ9Y3T9 749 aaKnown RBP15.81■□□□□ 0.12
CTSA-211ENST00000606066 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CTSA-211ENST00000606066 TRIP12Q14669 1992 aaPredicted RBP15.8■□□□□ 0.12
CTSA-211ENST00000606066 TNFRSF10AO00220 468 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 SFPQP23246 707 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTSA-211ENST00000606066 GLRA2P23416 452 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 PHKA2P46019 1235 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTSA-211ENST00000606066 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 SV2BQ7L1I2 683 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 SRGAP1Q7Z6B7 1085 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 TMEM40Q8WWA1 233 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 CHAMP1Q96JM3 812 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 ZNF668Q96K58 619 aaPredicted RBP15.8■□□□□ 0.12
CTSA-211ENST00000606066 GAS2L1Q99501 681 aaPredicted RBP15.8■□□□□ 0.12
CTSA-211ENST00000606066 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 OSBPL7Q9BZF2 842 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 CUEDC2Q9H467 287 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 ST3GAL5Q9UNP4 418 aa15.8■□□□□ 0.12
CTSA-211ENST00000606066 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
CTSA-211ENST00000606066 CMA1P23946 247 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 PBX2P40425 430 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 DHX8Q14562 1220 aaKnown RBP15.79■□□□□ 0.12
CTSA-211ENST00000606066 MCM6Q14566 821 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 FAM228AQ86W67 206 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 GPBP1Q86WP2 473 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 PDILTQ8N807 584 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 PHOSPHO2Q8TCD6 241 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 SLC9A7Q96T83 725 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 RUSC1Q9BVN2 902 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 NFKBIZQ9BYH8 718 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 LRRC27Q9C0I9 530 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 C2orf40Q9H1Z8 148 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 IFT122Q9HBG6 1241 aa15.79■□□□□ 0.12
CTSA-211ENST00000606066 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 BDP1A6H8Y1 2624 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 LRRIQ4A6NIV6 560 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 GRXCR1A8MXD5 290 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 HIP1RO75146 1068 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 AMHP03971 560 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 ZSCAN20P17040 1043 aaPredicted RBP15.78■□□□□ 0.12
CTSA-211ENST00000606066 NAMPTP43490 491 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 PTENP60484 403 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 NCBP1Q09161 790 aaKnown RBP15.78■□□□□ 0.12
CTSA-211ENST00000606066 CAPSQ13938 189 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 RAB30Q15771 203 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
CTSA-211ENST00000606066 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
CTSA-211ENST00000606066 ASB2Q96Q27 587 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms