RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SLC37A4O43826 429 aa23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 RBM10P98175 930 aaKnown RBP23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 PLCB3Q01970 1234 aa23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 LRRC43Q8N309 656 aa23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 ZNF558Q96NG5 402 aa23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 LZTS1Q9Y250 596 aa23.8■■□□□ 1.4
PPFIA3-209ENST00000602783 A0A087WZ62 844 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 EOMESO95936 686 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 PBX3P40426 434 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 NEK4P51957 841 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 PSMC5P62195 406 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 DUSP6Q16828 381 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 CLLU1OSQ5K130 101 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 PLPP4Q5VZY2 271 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 RNF135Q8IUD6 432 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 OXER1Q8TDS5 423 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 CDCA3Q99618 268 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 FDXACB1Q9BRP7 624 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 DACT1Q9NYF0 836 aa23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 SUCLA2Q9P2R7 463 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-209ENST00000602783 EML1O00423 815 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 MAFO75444 373 aaPredicted RBP23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 KRT17Q04695 432 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 ANO5Q75V66 913 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 NEK8Q86SG6 692 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 ZNF598Q86UK7 904 aaKnown RBP23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 RHPN2Q8IUC4 686 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 VN1R2Q8NFZ6 395 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 HELQQ8TDG4 1101 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 WASF1Q92558 559 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 TCF25Q9BQ70 676 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 ENTPD7Q9NQZ7 604 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 CHST12Q9NRB3 414 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 SPG21Q9NZD8 308 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 MUTYHQ9UIF7 546 aa23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 USP15Q9Y4E8 981 aaPredicted RBP23.78■■□□□ 1.4
PPFIA3-209ENST00000602783 FDPSP14324 419 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 ATF7P17544 494 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 PPM1AP35813 382 aa23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 PIK3AP1Q6ZUJ8 805 aa23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 FAM20AQ96MK3 541 aa23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 INO80BQ9C086 356 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-209ENST00000602783 FSD2A1L4K1 749 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 SFPQP23246 707 aaKnown RBP eCLIP23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 PPP2R5CQ13362 524 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 HERC4Q5GLZ8 1057 aaPredicted RBP23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 PLA2G4FQ68DD2 849 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 PPP4R3AQ6IN85 833 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 TMC7Q7Z402 723 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 ZNF410Q86VK4 478 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 KSR1Q8IVT5 923 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 NSUN7Q8NE18 718 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 KCNMB3Q9NPA1 279 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 NGRNQ9NPE2 291 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 VAV3Q9UKW4 847 aa23.76■■□□□ 1.39
PPFIA3-209ENST00000602783 ARID2Q68CP9 1835 aa23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 HIDE1A8MVS5 230 aa23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 CCNT1O60563 726 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 GCFC2P16383 781 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 PHKA2P46019 1235 aa23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 QARSP47897 775 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 NPEPPSP55786 919 aa23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 TWF2Q6IBS0 349 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 JPH2Q9BR39 696 aaPredicted RBP23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 CYP26B1Q9NR63 512 aa23.75■■□□□ 1.39
PPFIA3-209ENST00000602783 FAM205CA6NFA0 338 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 LOC730098B7Z3J9 87 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 MARCH6O60337 910 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 DKC1O60832 514 aaKnown RBP eCLIP23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 P4HBP07237 508 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 KRT2P35908 639 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 LONRF3Q496Y0 759 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 EARS2Q5JPH6 523 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 SLC39A11Q8N1S5 342 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 NLRP4Q96MN2 994 aa23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 MRPL9Q9BYD2 267 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 PIN4Q9Y237 131 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-209ENST00000602783 NT5C1B-RDH14C9J2C7 533 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 JAK2O60674 1132 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 SRGAP2BP0DMP2 458 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 TECP42680 631 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 ALDH7A1P49419 539 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 FOSBP53539 338 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 ST3GAL1Q11201 340 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 NR5A1Q13285 461 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 KCNC3Q14003 757 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 LLGL2Q6P1M3 1020 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 TMEM184AQ6ZMB5 413 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 CATSPER4Q7RTX7 472 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 ZNF579Q8NAF0 562 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 HAS1Q92839 578 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 LPPQ93052 612 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 CEP170P1Q96L14 293 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 TRAIPQ9BWF2 469 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 PHF7Q9BWX1 381 aaPredicted RBP23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 BRMS1Q9HCU9 246 aa23.73■■□□□ 1.39
PPFIA3-209ENST00000602783 MUC6Q6W4X9 2439 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 TBX3O15119 743 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 SKIP12755 728 aa23.72■■□□□ 1.39
PPFIA3-209ENST00000602783 BCAR1P56945 870 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms