RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
SFXN2-208ENST00000602660 PCDHB7Q9Y5E2 793 aa17.82■□□□□ 0.44
SFXN2-208ENST00000602660 RB1P06400 928 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 IBSPP21815 317 aaPredicted RBP17.81■□□□□ 0.44
SFXN2-208ENST00000602660 RARRES1P49788 294 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
SFXN2-208ENST00000602660 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 ECHDC2Q86YB7 292 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 PSPC1Q8WXF1 523 aaKnown RBP17.81■□□□□ 0.44
SFXN2-208ENST00000602660 TUFT1Q9NNX1 390 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
SFXN2-208ENST00000602660 KIF3AQ9Y496 699 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 C5orf42Q9H799 3197 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 PDCD11Q14690 1871 aaKnown RBP17.81■□□□□ 0.44
SFXN2-208ENST00000602660 BDP1A6H8Y1 2624 aa17.81■□□□□ 0.44
SFXN2-208ENST00000602660 GRM6O15303 877 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 GAS2O43903 313 aaKnown RBP17.8■□□□□ 0.44
SFXN2-208ENST00000602660 FGFR1P11362 822 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
SFXN2-208ENST00000602660 TFF2Q03403 129 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 LAMTOR4Q0VGL1 99 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 CUL4AQ13619 759 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 CAMK1Q14012 370 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 IL17AQ16552 155 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 EXOC8Q8IYI6 725 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 MTRQ99707 1265 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 POLR3CQ9BUI4 534 aaPredicted RBP17.8■□□□□ 0.44
SFXN2-208ENST00000602660 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
SFXN2-208ENST00000602660 RWDD3Q9Y3V2 267 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 TCHHQ07283 1943 aa17.8■□□□□ 0.44
SFXN2-208ENST00000602660 A0A0U1RQF3 1178 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 TBKBP1A7MCY6 615 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 DLL1O00548 723 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
SFXN2-208ENST00000602660 ZSCAN20P17040 1043 aaPredicted RBP17.79■□□□□ 0.44
SFXN2-208ENST00000602660 RPA1P27694 616 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 PTGDRQ13258 359 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 ECM1Q16610 540 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 CLLU1OSQ5K130 101 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 POTEGQ6S5H5 508 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 ASAP3Q8TDY4 903 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
SFXN2-208ENST00000602660 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 CASD1Q96PB1 797 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 C11orf84Q9BUA3 381 aaPredicted RBP17.79■□□□□ 0.44
SFXN2-208ENST00000602660 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 PLVAPQ9BX97 442 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 CWH43Q9H720 699 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 SMC3Q9UQE7 1217 aa17.79■□□□□ 0.44
SFXN2-208ENST00000602660 MTCL1Q9Y4B5 1905 aaKnown RBP17.78■□□□□ 0.44
SFXN2-208ENST00000602660 DGAT1O75907 488 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 ITGB1P05556 798 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFXN2-208ENST00000602660 DNAJB1P25685 340 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 ARL2P36404 184 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 LRRC55Q6ZSA7 311 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 P2RX5Q93086 422 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 ASB2Q96Q27 587 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 ATP6V0A4Q9HBG4 840 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
SFXN2-208ENST00000602660 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
SFXN2-208ENST00000602660 HOXA11P31270 313 aaPredicted RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 PTENP60484 403 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 CAPSQ13938 189 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 TJAP1Q5JTD0 557 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 MCTP1Q6DN14 999 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 IFNLR1Q8IU57 520 aaPredicted RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 RNF149Q8NC42 400 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 INO80BQ9C086 356 aaPredicted RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 TMEM117Q9H0C3 514 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 ALG13Q9NP73 1137 aaKnown RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 TYW1Q9NV66 732 aaKnown RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
SFXN2-208ENST00000602660 DACT1Q9NYF0 836 aa17.77■□□□□ 0.44
SFXN2-208ENST00000602660 MEIS3P2A8K0S8 358 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 ASAP2O43150 1006 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
SFXN2-208ENST00000602660 EOMESO95936 686 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 GLRA2P23416 452 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 PRPHP41219 470 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 PHKA2P46019 1235 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
SFXN2-208ENST00000602660 COL19A1Q14993 1142 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 PTPROQ16827 1216 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 TIGD5Q53EQ6 642 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 CATSPER4Q7RTX7 472 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 SPPL3Q8TCT6 385 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 NACC1Q96RE7 527 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 LMAN2LQ9H0V9 348 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 GPRC5CQ9NQ84 441 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 FAM105AQ9NUU6 356 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 COG5Q9UP83 839 aa17.76■□□□□ 0.43
SFXN2-208ENST00000602660 PIN4Q9Y237 131 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms