RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
TRIM11-205ENST00000602308 ESR2Q92731 530 aa16.46■□□□□ 0.23
TRIM11-205ENST00000602308 FGF14Q92915 247 aa16.46■□□□□ 0.23
TRIM11-205ENST00000602308 EMILIN2Q9BXX0 1053 aa16.46■□□□□ 0.23
TRIM11-205ENST00000602308 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 PCP11498 1178 aaKnown RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 TARSP26639 723 aaKnown RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 MTAPQ13126 283 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 FZD5Q13467 585 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 ZBTB41Q5SVQ8 909 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 GET4Q7L5D6 327 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 ZNF598Q86UK7 904 aaKnown RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 TNPO1Q92973 898 aaKnown RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 ZNF707Q96C28 371 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-205ENST00000602308 GPRASP2Q96D09 838 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 PIGSQ96S52 555 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■□□□ 11.6
TRIM11-205ENST00000602308 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
TRIM11-205ENST00000602308 DMXL2Q8TDJ6 3036 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 MAST4O15021 2626 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 GPR32O75388 356 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM11-205ENST00000602308 GALTP07902 379 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 ITGB5P18084 799 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 LIMK1P53667 647 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 ENAHQ8N8S7 591 aaPredicted RBP16.44■□□□□ 0.22
TRIM11-205ENST00000602308 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
TRIM11-205ENST00000602308 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
TRIM11-205ENST00000602308 AZI2Q9H6S1 392 aa16.44■□□□□ 0.22
TRIM11-205ENST00000602308 KCNK5O95279 499 aa16.43■□□□□ 0.22
TRIM11-205ENST00000602308 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
TRIM11-205ENST00000602308 RSPO2Q6UXX9 243 aaPredicted RBP16.43■□□□□ 0.22
TRIM11-205ENST00000602308 PLPPR4Q7Z2D5 763 aa16.43■□□□□ 0.22
TRIM11-205ENST00000602308 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
TRIM11-205ENST00000602308 NRDE2Q9H7Z3 1164 aa16.43■□□□□ 0.22
TRIM11-205ENST00000602308 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
TRIM11-205ENST00000602308 A0A0U1RQF3 1178 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 ZSCAN20P17040 1043 aaPredicted RBP16.42■□□□□ 0.22
TRIM11-205ENST00000602308 STAT5BP51692 787 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 RXFP3Q9NSD7 469 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
TRIM11-205ENST00000602308 PAPLNO95428 1278 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 VTNP04004 478 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 SPINK2P20155 84 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
TRIM11-205ENST00000602308 RNF41Q9H4P4 317 aaPredicted RBP16.41■□□□□ 0.22
TRIM11-205ENST00000602308 JPH1Q9HDC5 661 aaPredicted RBP16.41■□□□□ 0.22
TRIM11-205ENST00000602308 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
TRIM11-205ENST00000602308 DNAJB4Q9UDY4 337 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 WASF3Q9UPY6 502 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 RALGAPA1Q6GYQ0 2036 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 MYH15Q9Y2K3 1946 aa16.41■□□□□ 0.22
TRIM11-205ENST00000602308 PALM3A6NDB9 673 aaPredicted RBP16.4■□□□□ 0.22
TRIM11-205ENST00000602308 TMEM8BA6NDV4 472 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 HRO43593 1189 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 FOXD2O60548 495 aaPredicted RBP16.4■□□□□ 0.22
TRIM11-205ENST00000602308 SLC11A1P49279 550 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 NRLP54845 237 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 TRAF1Q13077 416 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 AASDHQ4L235 1098 aaPredicted RBP16.4■□□□□ 0.22
TRIM11-205ENST00000602308 SOWAHCQ53LP3 525 aaPredicted RBP16.4■□□□□ 0.22
TRIM11-205ENST00000602308 NELL2Q99435 816 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 HELLSQ9NRZ9 838 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 TBC1D13Q9NVG8 400 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 SLC9A2Q9UBY0 812 aa16.4■□□□□ 0.22
TRIM11-205ENST00000602308 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
TRIM11-205ENST00000602308 LAMA5O15230 3695 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 SHISA7A6NL88 538 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 MEIS2O14770 477 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 NCAM2O15394 837 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 CYTH3O43739 400 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 B4GALT3O60512 393 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 SPATA31D3P0C874 917 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 ACTR2P61160 394 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 SRSF5Q13243 272 aaKnown RBP16.39■□□□□ 0.21
TRIM11-205ENST00000602308 MTMR1Q13613 665 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 SPATA31D4Q6ZUB0 917 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 TPRG1Q6ZUI0 275 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
TRIM11-205ENST00000602308 GATA6Q92908 595 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 LSM14BQ9BX40 385 aaKnown RBP16.39■□□□□ 0.21
TRIM11-205ENST00000602308 NT5C3AQ9H0P0 336 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 PIDD1Q9HB75 910 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 MRPL17Q9NRX2 175 aaKnown RBP16.39■□□□□ 0.21
TRIM11-205ENST00000602308 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
TRIM11-205ENST00000602308 AKAP13Q12802 2813 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms