RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 ALCAMQ13740 583 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 HIC1Q14526 733 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 MTHFD1LQ6UB35 978 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 CXCL17Q6UXB2 119 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 IRF2BP1Q8IU81 584 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 LMBR1Q8WVP7 490 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 TCP11Q8WWU5 503 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 MTG1Q9BT17 334 aaPredicted RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 HMX1Q9NP08 348 aaPredicted RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 MAGEB2O15479 319 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 TGFB1I1O43294 461 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 CAPSQ13938 189 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 LHX8Q68G74 356 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 SARM1Q6SZW1 724 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 METTL13Q8N6R0 699 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 EEF2KMTQ96G04 330 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 TSG101Q99816 390 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 KATNAL1Q9BW62 490 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
DDX49-213ENST00000602113 SUCLA2Q9P2R7 463 aaPredicted RBP19.24■□□□□ 0.67
DDX49-213ENST00000602113 RRN3P2A6NIE6 340 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 PDXKO00764 312 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 GJB1P08034 283 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 NAMPTP43490 491 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 LAMTOR4Q0VGL1 99 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 PPP2R5AQ15172 486 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 KCNA10Q16322 511 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 LRRC55Q6ZSA7 311 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 RETREG2Q8NC44 543 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 PSPC1Q8WXF1 523 aaKnown RBP19.23■□□□□ 0.67
DDX49-213ENST00000602113 TRAF3IP3Q9Y228 551 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 NRCAMQ92823 1304 aa19.23■□□□□ 0.67
DDX49-213ENST00000602113 DENND3A2RUS2 1198 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 ZEB2O60315 1214 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 MYCNP04198 464 aaPredicted RBP19.22■□□□□ 0.67
DDX49-213ENST00000602113 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
DDX49-213ENST00000602113 TAS1R3Q7RTX0 852 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 ACCSQ96QU6 501 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 THAP9Q9H5L6 903 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 TYW1Q9NV66 732 aaKnown RBP19.22■□□□□ 0.67
DDX49-213ENST00000602113 TBX20Q9UMR3 447 aa19.22■□□□□ 0.67
DDX49-213ENST00000602113 LRRIQ4A6NIV6 560 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 MSCO60682 206 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 ADCY5O95622 1261 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 ASGR1P07306 291 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 DNM2P50570 870 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 ADAM17P78536 824 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 FANCCQ00597 558 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 MXD4Q14582 209 aaPredicted RBP19.21■□□□□ 0.67
DDX49-213ENST00000602113 EDRF1Q3B7T1 1238 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
DDX49-213ENST00000602113 NOC3LQ8WTT2 800 aaKnown RBP19.21■□□□□ 0.67
DDX49-213ENST00000602113 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 KCNG1Q9UIX4 513 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 CENPFP49454 3210 aa19.21■□□□□ 0.67
DDX49-213ENST00000602113 MBLAC1A4D2B0 266 aaPredicted RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 CDK11BP21127 795 aaKnown RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 HOXC8P31273 242 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 NFRKBQ6P4R8 1299 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 APTXQ7Z2E3 356 aaKnown RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 RHPN2Q8IUC4 686 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 MAP4K3Q8IVH8 894 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 DEPTORQ8TB45 409 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 KCNN1Q92952 543 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 HVCN1Q96D96 273 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.2■□□□□ 0.66
DDX49-213ENST00000602113 UNC93B1Q9H1C4 597 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 KCNJ18B7U540 433 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 H0YCG3 227 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 CALUO43852 315 aaPredicted RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 SRGAP2CP0DJJ0 459 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 ZNF75DP51815 510 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 ZNF200P98182 395 aaPredicted RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
DDX49-213ENST00000602113 KCNJ12Q14500 433 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 NBPF20Q3BBV1 942 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 RNF180Q86T96 592 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 KIAA0319LQ8IZA0 1049 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 SYCP3Q8IZU3 236 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 C7orf31Q8N865 590 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 TRIM5Q9C035 493 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 GBP3Q9H0R5 595 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 TMEM206Q9H813 350 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
DDX49-213ENST00000602113 TISP43B9A030 160 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 CLIC2O15247 247 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 SLC9C1Q4G0N8 1177 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 TCP11X2Q5H9J9 407 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 CDCA2Q69YH5 1023 aaPredicted RBP19.19■□□□□ 0.66
DDX49-213ENST00000602113 RUFY4Q6ZNE9 571 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 PCSK9Q8NBP7 692 aaKnown RBP19.19■□□□□ 0.66
DDX49-213ENST00000602113 RNF149Q8NC42 400 aa19.19■□□□□ 0.66
DDX49-213ENST00000602113 ZNF668Q96K58 619 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms