RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ZNF598Q86UK7 904 aaKnown RBP19.5■□□□□ 0.71
IRF3-230ENST00000601809 IFNLR1Q8IU57 520 aaPredicted RBP19.5■□□□□ 0.71
IRF3-230ENST00000601809 FIBCD1Q8N539 461 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 NLRP4Q96MN2 994 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 MTRQ99707 1265 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 MMTAG2Q9BU76 263 aaKnown RBP19.5■□□□□ 0.71
IRF3-230ENST00000601809 TMEM161AQ9NX61 479 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 LMCD1Q9NZU5 365 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 H3BNC9 293 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 ASAP2O43150 1006 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 POU5F1BQ06416 359 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 ECHDC2Q86YB7 292 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 FBXO22Q8NEZ5 403 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 ASAP3Q8TDY4 903 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 TCP11Q8WWU5 503 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 NACC1Q96RE7 527 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 ATP6V0A4Q9HBG4 840 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 PRDM6Q9NQX0 595 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 CHST12Q9NRB3 414 aa19.49■□□□□ 0.71
IRF3-230ENST00000601809 MRPL42Q9Y6G3 142 aaKnown RBP19.49■□□□□ 0.71
IRF3-230ENST00000601809 A0A0U1RQF3 1178 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 PP2D1A8MPX8 630 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 GLRA2P23416 452 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 BMPR1AP36894 532 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 CAPSQ13938 189 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 BTG3Q14201 252 aaPredicted RBP19.48■□□□□ 0.71
IRF3-230ENST00000601809 FAM102BQ5T8I3 360 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 SRGAP1Q7Z6B7 1085 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 ERMNQ8TAM6 284 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 INO80BQ9C086 356 aaPredicted RBP19.48■□□□□ 0.71
IRF3-230ENST00000601809 LRWD1Q9UFC0 647 aa19.48■□□□□ 0.71
IRF3-230ENST00000601809 SYT1P21579 422 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
IRF3-230ENST00000601809 HOXA11P31270 313 aaPredicted RBP19.47■□□□□ 0.71
IRF3-230ENST00000601809 PTENP60484 403 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 HAUS3Q68CZ6 603 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 BRAPQ7Z569 592 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.47■□□□□ 0.71
IRF3-230ENST00000601809 SLC17A8Q8NDX2 589 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 NFKBIZQ9BYH8 718 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 AGPAT5Q9NUQ2 364 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 PCDHB7Q9Y5E2 793 aa19.47■□□□□ 0.71
IRF3-230ENST00000601809 PLXNA4Q9HCM2 1894 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 USO1O60763 962 aaKnown RBP19.46■□□□□ 0.71
IRF3-230ENST00000601809 RB1P06400 928 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 SRGAP2CP0DJJ0 459 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 FGFR1P11362 822 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 ZSCAN20P17040 1043 aaPredicted RBP19.46■□□□□ 0.71
IRF3-230ENST00000601809 CDC25AP30304 524 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 CCT6AP40227 531 aaKnown RBP19.46■□□□□ 0.71
IRF3-230ENST00000601809 RESTQ13127 1097 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 MXD4Q14582 209 aaPredicted RBP19.46■□□□□ 0.71
IRF3-230ENST00000601809 AMHR2Q16671 573 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 HYIQ5T013 277 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 ARL6IP4Q66PJ3 421 aaKnown RBP19.46■□□□□ 0.71
IRF3-230ENST00000601809 RNF149Q8NC42 400 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 CASD1Q96PB1 797 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 GPRC5CQ9NQ84 441 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 HCSTQ9UBK5 93 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 RWDD3Q9Y3V2 267 aa19.46■□□□□ 0.71
IRF3-230ENST00000601809 GTPBP6O43824 516 aaPredicted RBP19.45■□□□□ 0.7
IRF3-230ENST00000601809 PDCP20941 246 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 PHKA2P46019 1235 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 CCDC85BQ15834 202 aaPredicted RBP19.45■□□□□ 0.7
IRF3-230ENST00000601809 PAN2Q504Q3 1202 aaKnown RBP19.45■□□□□ 0.7
IRF3-230ENST00000601809 CLLU1OSQ5K130 101 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 UBXN11Q5T124 520 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 DTHD1Q6ZMT9 781 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 LRRC55Q6ZSA7 311 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 KCNK18Q7Z418 384 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 SNX29Q8TEQ0 813 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 POLR3FQ9H1D9 316 aaPredicted RBP19.45■□□□□ 0.7
IRF3-230ENST00000601809 CWH43Q9H720 699 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
IRF3-230ENST00000601809 LRFN2Q9ULH4 789 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 MTMR6Q9Y217 621 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 STK24Q9Y6E0 443 aa19.45■□□□□ 0.7
IRF3-230ENST00000601809 ZNF623O75123 536 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 EOMESO95936 686 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 CYP11B2P19099 503 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 CTNNB1P35222 781 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 MBTD1Q05BQ5 628 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 GPM6BQ13491 265 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 CAMK1Q14012 370 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 PADI6Q6TGC4 694 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 CATSPER4Q7RTX7 472 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 PPM1EQ8WY54 764 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 BSNDQ8WZ55 320 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 P2RX5Q93086 422 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 MRPL38Q96DV4 380 aaKnown RBP19.44■□□□□ 0.7
IRF3-230ENST00000601809 PNMA5Q96PV4 448 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 PLVAPQ9BX97 442 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 TMEM117Q9H0C3 514 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 DDX19AQ9NUU7 478 aaKnown RBP19.44■□□□□ 0.7
IRF3-230ENST00000601809 DACT1Q9NYF0 836 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
IRF3-230ENST00000601809 PIN4Q9Y237 131 aaKnown RBP19.44■□□□□ 0.7
IRF3-230ENST00000601809 TBKBP1A7MCY6 615 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms