RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
SNRPA-209ENST00000601253 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
SNRPA-209ENST00000601253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 ENPP3O14638 875 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 NCLP19338 710 aaKnown RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 GLRA2P23416 452 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 SLC12A3P55017 1021 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 DEFB103AP81534 67 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 CAPSQ13938 189 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 RAB30Q15771 203 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 SPECC1Q5M775 1068 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 AXDND1Q5T1B0 1012 aaPredicted RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 MAEAQ7L5Y9 396 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 ZNF668Q96K58 619 aaPredicted RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 DRC1Q96MC2 740 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 C1orf112Q9NSG2 853 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
SNRPA-209ENST00000601253 LOXHD1Q8IVV2 1947 aa15.31■□□□□ 0.04
SNRPA-209ENST00000601253 DENND3A2RUS2 1198 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
SNRPA-209ENST00000601253 NAMPTP43490 491 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNRPA-209ENST00000601253 PTENP60484 403 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 RRAGBQ5VZM2 374 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 FAM109BQ6ICB4 259 aaPredicted RBP15.3■□□□□ 0.04
SNRPA-209ENST00000601253 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
SNRPA-209ENST00000601253 LINC01599Q8WXQ3 324 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 RAD54LQ92698 747 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 IFT74Q96LB3 600 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 RUSC1Q9BVN2 902 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 C17orf75Q9HAS0 396 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 CHST12Q9NRB3 414 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 RGS18Q9NS28 235 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 KCNG1Q9UIX4 513 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 MSRAQ9UJ68 235 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
SNRPA-209ENST00000601253 TMEM265A0A087WTH1 108 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 GRXCR1A8MXD5 290 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 GJB5O95377 273 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
SNRPA-209ENST00000601253 DSC3Q14574 896 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 CDCA2Q69YH5 1023 aaPredicted RBP15.29■□□□□ 0.04
SNRPA-209ENST00000601253 SHC4Q6S5L8 630 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 SLC24A5Q71RS6 500 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 CATSPER4Q7RTX7 472 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 RTN4RL1Q86UN2 441 aaPredicted RBP15.29■□□□□ 0.04
SNRPA-209ENST00000601253 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 MYOCDQ8IZQ8 938 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
SNRPA-209ENST00000601253 TOP1MTQ969P6 601 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 ADAM2Q99965 735 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
SNRPA-209ENST00000601253 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 MGEA5O60502 916 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 HIP1RO75146 1068 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 STAG3L1P0CL83 205 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 DNAJB2P25686 324 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 STAT6P42226 847 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 NCBP1Q09161 790 aaKnown RBP15.28■□□□□ 0.04
SNRPA-209ENST00000601253 GPBP1Q86WP2 473 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 NPAS4Q8IUM7 802 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 DEPTORQ8TB45 409 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 PYM1Q9BRP8 204 aaKnown RBP15.28■□□□□ 0.04
SNRPA-209ENST00000601253 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 TRAIPQ9BWF2 469 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 PBX4Q9BYU1 374 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 CUEDC2Q9H467 287 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 FAM13BQ9NYF5 915 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 ODF2LQ9ULJ1 636 aa15.28■□□□□ 0.04
SNRPA-209ENST00000601253 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 PHLPP2Q6ZVD8 1323 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 C9IYK1 514 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 INO80B-WBP1J3KQ70 363 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 TLL1O43897 1013 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 CSDE1O75534 798 aaKnown RBP15.27■□□□□ 0.04
SNRPA-209ENST00000601253 ERLIN2O94905 339 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 FGFR4P22455 802 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 AXLP30530 894 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.04
SNRPA-209ENST00000601253 EFNA5P52803 228 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 HTRA4P83105 476 aaPredicted RBP15.27■□□□□ 0.04
SNRPA-209ENST00000601253 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 MAPK7Q13164 816 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 DMP1Q13316 513 aaPredicted RBP15.27■□□□□ 0.04
SNRPA-209ENST00000601253 MCM6Q14566 821 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 NAALADL2Q58DX5 795 aa15.27■□□□□ 0.04
SNRPA-209ENST00000601253 ARSHQ5FYA8 562 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms