RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 GCOM2Q9BZD3 368 aaPredicted RBP14.29□□□□□ -0.12
FKRP-223ENST00000600872 TMEM117Q9H0C3 514 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 ZSWIM4Q9H7M6 989 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 TTC12Q9H892 705 aaPredicted RBP14.29□□□□□ -0.12
FKRP-223ENST00000600872 MINDY3Q9H8M7 445 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 ATP6V0A4Q9HBG4 840 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
FKRP-223ENST00000600872 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 PCDHGC5Q9Y5F6 944 aa14.29□□□□□ -0.12
FKRP-223ENST00000600872 DKC1O60832 514 aaKnown RBP eCLIP14.28□□□□□ -0.12
FKRP-223ENST00000600872 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
FKRP-223ENST00000600872 IBSPP21815 317 aaPredicted RBP14.28□□□□□ -0.12
FKRP-223ENST00000600872 HOXA11P31270 313 aaPredicted RBP14.28□□□□□ -0.12
FKRP-223ENST00000600872 DNM2P50570 870 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 C4orf32Q8N8J7 132 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 COLGALT1Q8NBJ5 622 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 POF1BQ8WVV4 589 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 PRPF31Q8WWY3 499 aaKnown RBP14.28□□□□□ -0.12
FKRP-223ENST00000600872 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 C8orf76Q96K31 380 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
FKRP-223ENST00000600872 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
FKRP-223ENST00000600872 GRXCR2A6NFK2 248 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 POTEMA6NI47 508 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.13
FKRP-223ENST00000600872 LINC01565O15544 149 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 TBX10O75333 385 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 EOMESO95936 686 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 IL9P15248 144 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 ZSCAN20P17040 1043 aaPredicted RBP14.27□□□□□ -0.13
FKRP-223ENST00000600872 RFC5P40937 340 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 TXKP42681 527 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 PHKA2P46019 1235 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 TRIM29Q14134 588 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 EMC2Q15006 297 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 TPH2Q8IWU9 490 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.13
FKRP-223ENST00000600872 NLRP4Q96MN2 994 aa14.27□□□□□ -0.13
FKRP-223ENST00000600872 JPH2Q9BR39 696 aaPredicted RBP14.27□□□□□ -0.13
FKRP-223ENST00000600872 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
FKRP-223ENST00000600872 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
FKRP-223ENST00000600872 A0A087WWV3 80 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 FSCN2O14926 492 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 ZNF623O75123 536 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 FGF18O76093 207 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.13
FKRP-223ENST00000600872 MCM7P33993 719 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 RARRES1P49788 294 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
FKRP-223ENST00000600872 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
FKRP-223ENST00000600872 ERVFC1P60507 584 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
FKRP-223ENST00000600872 LAMTOR4Q0VGL1 99 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 ADAM15Q13444 863 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 UBXN11Q5T124 520 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 OTUD6AQ7L8S5 288 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
FKRP-223ENST00000600872 SLC7A3Q8WY07 619 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 SCLT1Q96NL6 688 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 ANKEF1Q9NU02 776 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 AGPAT5Q9NUQ2 364 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 TRIOO75962 3097 aa14.26□□□□□ -0.13
FKRP-223ENST00000600872 HOXA2O43364 376 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
FKRP-223ENST00000600872 MARCH6O60337 910 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 MED24O75448 989 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 CSPG5O95196 566 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 GLP2RO95838 553 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
FKRP-223ENST00000600872 ARL2P36404 184 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 PBX3P40426 434 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 PLCB3Q01970 1234 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 UBE3AQ05086 875 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 KCNC3Q14003 757 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 NBR1Q14596 966 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 RABEP1Q15276 862 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 PTCRAQ6ISU1 281 aaPredicted RBP14.25□□□□□ -0.13
FKRP-223ENST00000600872 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 CATSPER3Q86XQ3 398 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
FKRP-223ENST00000600872 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 FAM178BQ8IXR5 827 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 EXOC8Q8IYI6 725 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 HELQQ8TDG4 1101 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 PIGOQ8TEQ8 1089 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 LPPQ93052 612 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 MSLNLQ96KJ4 702 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
FKRP-223ENST00000600872 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 CLDND1Q9NY35 253 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 PIN4Q9Y237 131 aaKnown RBP14.25□□□□□ -0.13
FKRP-223ENST00000600872 PCDHB12Q9Y5F1 795 aa14.25□□□□□ -0.13
FKRP-223ENST00000600872 ASAP2O43150 1006 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms