RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 BSNDQ8WZ55 320 aa15.86■□□□□ 0.13
UPF1-211ENST00000600868 MAN1B1Q9UKM7 699 aa15.86■□□□□ 0.13
UPF1-211ENST00000600868 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 TLR3O15455 904 aaKnown RBP15.85■□□□□ 0.13
UPF1-211ENST00000600868 CAND2O75155 1236 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 VTNP04004 478 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 SCP2P22307 547 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 NPTX2P47972 431 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 SMTNP53814 917 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 PEX3P56589 373 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 TFDP1Q14186 410 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
UPF1-211ENST00000600868 FAM26FQ5R3K3 315 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 FAM178BQ8IXR5 827 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 KCNN1Q92952 543 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 FIZ1Q96SL8 496 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 ST6GALNAC4Q9H4F1 302 aa15.85■□□□□ 0.13
UPF1-211ENST00000600868 H0YCG3 227 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 GPR32O75388 356 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 GPC3P51654 580 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 NLRP11P59045 1033 aaKnown RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 TLE2Q04725 743 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 RBL2Q08999 1139 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 CAPSQ13938 189 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 MORC3Q14149 939 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 TRIM60Q495X7 471 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 ZNF658Q5TYW1 1059 aaPredicted RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 CDCA2Q69YH5 1023 aaPredicted RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 ZNF720Q7Z2F6 126 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 ZNF410Q86VK4 478 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 RNF149Q8NC42 400 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 DHX38Q92620 1227 aaKnown RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 WNT8BQ93098 351 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 NFKBIZQ9BYH8 718 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 ADAMTS10Q9H324 1103 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 MRPL44Q9H9J2 332 aaKnown RBP15.84■□□□□ 0.13
UPF1-211ENST00000600868 KMT5AQ9NQR1 393 aa15.84■□□□□ 0.13
UPF1-211ENST00000600868 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 LRRIQ4A6NIV6 560 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 CCDC169A6NNP5 214 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 BIN1O00499 593 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 SRGAP2CP0DJJ0 459 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 ABCD1P33897 745 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 THPOP40225 353 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 PTENP60484 403 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 MRPS6P82932 125 aaKnown RBP15.83■□□□□ 0.12
UPF1-211ENST00000600868 STK4Q13043 487 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 ALCAMQ13740 583 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 IFNLR1Q8IU57 520 aaPredicted RBP15.83■□□□□ 0.12
UPF1-211ENST00000600868 TNS4Q8IZW8 715 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 TMEM161BQ8NDZ6 487 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 DEPTORQ8TB45 409 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 HPS3Q969F9 1004 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 NLRP4Q96MN2 994 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 STRA6Q9BX79 667 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 SLC39A2Q9NP94 309 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 TBC1D7Q9P0N9 293 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 ARHGAP28Q9P2N2 729 aa15.83■□□□□ 0.12
UPF1-211ENST00000600868 M0QZ92 97 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 SLC16A4O15374 487 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 PPP1R37O75864 691 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 BMP6P22004 513 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 NMT1P30419 496 aaKnown RBP15.82■□□□□ 0.12
UPF1-211ENST00000600868 PHKA2P46019 1235 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 EFNA5P52803 228 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 NLRP12P59046 1061 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 GTF2BQ00403 316 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 FAAP100Q0VG06 881 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 BFSP2Q13515 415 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 KIZQ2M2Z5 673 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 COBLL1Q53SF7 1204 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 FAM26DQ5JW98 314 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 SASS6Q6UVJ0 657 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 EPM2AIP1Q7L775 607 aaPredicted RBP15.82■□□□□ 0.12
UPF1-211ENST00000600868 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 ZBTB8OSQ8IWT0 167 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 KIAA0895Q8NCT3 520 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 HVCN1Q96D96 273 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 CELF4Q9BZC1 486 aaKnown RBP15.82■□□□□ 0.12
UPF1-211ENST00000600868 TMEM134Q9H6X4 195 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 IFT122Q9HBG6 1241 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 ATP11BQ9Y2G3 1177 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 PHLPP2Q6ZVD8 1323 aa15.82■□□□□ 0.12
UPF1-211ENST00000600868 A0A087WZ62 844 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 SYCE3A1L190 88 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 K7ENM7 598 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
UPF1-211ENST00000600868 EIF3DO15371 548 aaKnown RBP eCLIP15.81■□□□□ 0.12
UPF1-211ENST00000600868 GCNT3O95395 438 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms