RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PRAMEF19Q5SWL8 479 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 PPFIBP1Q86W92 1011 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 SLC9A9Q8IVB4 645 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 ZNF784Q8NCA9 323 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 TMEM174Q8WUU8 243 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 TMEM143Q96AN5 459 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 JPH2Q9BR39 696 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 PDCL3Q9H2J4 239 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 METTL14Q9HCE5 456 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 DMAC2Q9NW81 257 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 TBX20Q9UMR3 447 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 OFD1O75665 1012 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 XRCC5P13010 732 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 HOXD8P13378 290 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 LRMPQ12912 555 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 TRIM14Q14142 442 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 KCNN1Q92952 543 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 TRPC6Q9Y210 931 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 EPB41P11171 864 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 YY1P25490 414 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 CYP2C19P33261 490 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 IER5Q5VY09 327 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 C12orf56Q8IXR9 622 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 TCP11Q8WWU5 503 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 MKNK1Q9BUB5 465 aa19.37■□□□□ 0.69
SHKBP1-224ENST00000600718 DENND3A2RUS2 1198 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ZBTB42B2RXF5 422 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 TPM1P09493 284 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 PSMC2P35998 433 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 NAMPTP43490 491 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 PPP2R3AQ06190 1150 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ZNF484Q5JVG2 852 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ERGIC2Q96RQ1 377 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ZMYND15Q9H091 742 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 IKZF4Q9H2S9 585 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 RNPEPQ9H4A4 650 aa19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ARMCX3Q9UH62 379 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 ZNF215Q9UL58 517 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 GNEQ9Y223 722 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHKBP1-224ENST00000600718 IGKV6-21A0A0C4DH24 114 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 NRDCO43847 1150 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 AKAP3O75969 853 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 MMP3P08254 477 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 GLRA2P23416 452 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 DGKDQ16760 1214 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 CEP135Q66GS9 1140 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 MAP4K3Q8IVH8 894 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 C16orf70Q9BSU1 422 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 ARHGAP28Q9P2N2 729 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 AKR1B15C9JRZ8 316 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 DYNC1LI2O43237 492 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 RBL2Q08999 1139 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 KIF22Q14807 665 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 ASAP3Q8TDY4 903 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 KIFC3Q9BVG8 833 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 NUP58Q9BVL2 599 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 Q9Y3F1 56 aa19.35■□□□□ 0.69
SHKBP1-224ENST00000600718 ADCY6O43306 1168 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 SKILP12757 684 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 MAP2K2P36507 400 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 CASP4P49662 377 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 CCDC112Q8NEF3 446 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 DEPTORQ8TB45 409 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 ARHGAP39Q9C0H5 1083 aa19.34■□□□□ 0.69
SHKBP1-224ENST00000600718 A6NJR5 290 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 H3BRB1 525 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 TBC1D8O95759 1140 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 CCZ1BP86790 482 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 CCZ1P86791 482 aaPredicted RBP19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 SP3Q02447 781 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 SYCP1Q15431 976 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 FAM186BQ8IYM0 893 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 TC2NQ8N9U0 490 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 RETREG2Q8NC44 543 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 IQCDQ96DY2 449 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 TUT1Q9H6E5 874 aaKnown RBP19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 ADGRA3Q8IWK6 1321 aa19.33■□□□□ 0.69
SHKBP1-224ENST00000600718 COL1A2P08123 1366 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 CYP2J2P51589 502 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 ADKP55263 362 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 MXD4Q14582 209 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 PRPF31Q8WWY3 499 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 PSPC1Q8WXF1 523 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 BORCS6Q96GS4 357 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 TMX1Q9H3N1 280 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 SUGCTQ9HAC7 445 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 PYCARDQ9ULZ3 195 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.68
SHKBP1-224ENST00000600718 MAGEB2O15479 319 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 EXOC3O60645 756 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 GYPCP04921 128 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 ZNF286BP0CG31 522 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 INSRRP14616 1297 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms