RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ZNF710Q8N1W2 664 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 DAGLBQ8NCG7 672 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 SMRP1Q8NCR6 262 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 ETNPPLQ8TBG4 499 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 DACT1Q9NYF0 836 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 M0R2N6 131 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 FSCN2O14926 492 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 CCNT1O60563 726 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 CDKL5O76039 1030 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 STBD1O95210 358 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 SP100P23497 879 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 PSMC5P62195 406 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 PDE12Q6L8Q7 609 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 PIK3AP1Q6ZUJ8 805 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 CATSPER4Q7RTX7 472 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 PIN4Q9Y237 131 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 INPP5FQ9Y2H2 1132 aa19.73■□□□□ 0.75
SHKBP1-223ENST00000600552 A0A0U1RQF3 1178 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 SRGAP2BP0DMP2 458 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 XBP1P17861 261 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 SFPQP23246 707 aaKnown RBP eCLIP19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 PPM1AP35813 382 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 FOSBP53539 338 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 NPEPPSP55786 919 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 PLCB3Q01970 1234 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 ANO5Q75V66 913 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 OXER1Q8TDS5 423 aa19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 CDCA3Q99618 268 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-223ENST00000600552 EPB41L2O43491 1005 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 MAFO75444 373 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 EOMESO95936 686 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 SRGAP2CP0DJJ0 459 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 ALDH7A1P49419 539 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 BCAR1P56945 870 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 CDC42EP1Q00587 391 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 NCAPH2Q6IBW4 605 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 B3GNT9Q6UX72 402 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 HFE2Q6ZVN8 426 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 NEK8Q86SG6 692 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 ZNF598Q86UK7 904 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 ZNF579Q8NAF0 562 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 TMEM87AQ8NBN3 555 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 TMEM143Q96AN5 459 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 CEP170P1Q96L14 293 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 MBOAT7Q96N66 472 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 PHF20Q9BVI0 1012 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 GBP3Q9H0R5 595 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 NGRNQ9NPE2 291 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 TPCN1Q9ULQ1 816 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 LZTS1Q9Y250 596 aa19.71■□□□□ 0.75
SHKBP1-223ENST00000600552 ZC3H11AO75152 810 aaKnown RBP eCLIP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 ATF7P17544 494 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 PHKA2P46019 1235 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 QARSP47897 775 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 HERC4Q5GLZ8 1057 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 ANKRD54Q6NXT1 300 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 MOXD1Q6UVY6 613 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 NECAB1Q8N987 351 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 CEP89Q96ST8 783 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 PHF7Q9BWX1 381 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 INO80BQ9C086 356 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 CYP26B1Q9NR63 512 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 CHST12Q9NRB3 414 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 ORC3Q9UBD5 711 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 MUC6Q6W4X9 2439 aa19.7■□□□□ 0.74
SHKBP1-223ENST00000600552 IGKV6-21A0A0C4DH24 114 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 FAM205CA6NFA0 338 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 PFKFB2O60825 505 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 CXCL14O95715 111 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 POLGP54098 1239 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 RNASELQ05823 741 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 SLC39A11Q8N1S5 342 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 AUTS2Q8WXX7 1259 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 EDAQ92838 391 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 TMEM169Q96HH4 297 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 MRPL9Q9BYD2 267 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 TSHZ2Q9NRE2 1034 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 RGL1Q9NZL6 768 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 CDH22Q9UJ99 828 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 VAV3Q9UKW4 847 aa19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 ARIH1Q9Y4X5 557 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-223ENST00000600552 MEIS3P2A8K0S8 358 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 LOC730098B7Z3J9 87 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 CYP4A11Q02928 519 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 PPP2R5CQ13362 524 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 CTTNQ14247 550 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 GLB1LQ6UWU2 654 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 ZBTB33Q86T24 672 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 ZNF410Q86VK4 478 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 PRPF31Q8WWY3 499 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 SLC7A3Q8WY07 619 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 DYDC2Q96IM9 177 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 FAM20AQ96MK3 541 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 WRAP73Q9P2S5 460 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 COL4A3BPQ9Y5P4 624 aa19.68■□□□□ 0.74
SHKBP1-223ENST00000600552 FSD2A1L4K1 749 aa19.67■□□□□ 0.74
SHKBP1-223ENST00000600552 DKC1O60832 514 aaKnown RBP eCLIP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms