RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 CROCCP2Q86T23 111 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 IRF2BP1Q8IU81 584 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 SPATA17Q96L03 361 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 DSCC1Q9BVC3 393 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 EPB41L1Q9H4G0 881 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 AMACRQ9UHK6 382 aa10.57□□□□□ -0.72
NFKB1-212ENST00000600343 ANGEL1Q9UNK9 670 aaKnown RBP10.57□□□□□ -0.72
NFKB1-212ENST00000600343 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.57□□□□□ -0.72
NFKB1-212ENST00000600343 CCDC162PA2VCL2 907 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 TRIM49BA6NDI0 452 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 FAM196BA6NMK8 535 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 PTPN4P29074 926 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 PHKBQ93100 1093 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 ECSITQ9BQ95 431 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 PABPC3Q9H361 631 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 USP29Q9HBJ7 922 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 ANGPTL2Q9UKU9 493 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 GIT1Q9Y2X7 761 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 MAPK13O15264 365 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 EYA4O95677 639 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 TKTP29401 623 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 METTL21CQ5VZV1 264 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 LMBRD2Q68DH5 695 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 CGB2Q6NT52 195 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 C11orf74Q86VG3 221 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 EPS8L3Q8TE67 593 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 GIPC3Q8TF64 312 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 SLC39A3Q9BRY0 314 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 SLC7A5P2Q9GIP4 190 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 KCNK9Q9NPC2 374 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 ARHGEF28Q8N1W1 1705 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 BCL9LQ86UU0 1499 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 TMEM120BA0PK00 339 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 WNT7AO00755 349 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 ZBTB17Q13105 803 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 PPP2R5CQ13362 524 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 LRP8Q14114 963 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 LPIN1Q14693 890 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 MEI1Q5TIA1 1274 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 CROCCP3Q8IVE0 287 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 FBXL16Q8N461 479 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
NFKB1-212ENST00000600343 GRAMD1AQ96CP6 724 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 VPS50Q96JG6 964 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 CCPG1Q9ULG6 757 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 NOX1Q9Y5S8 564 aa10.56□□□□□ -0.72
NFKB1-212ENST00000600343 TRIM64CA6NLI5 447 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 GOLGA8TH3BQL2 631 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 VILLO15195 856 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TTI1O43156 1089 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 ADAM23O75077 832 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 GOLGA8HP0CJ92 632 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CYP2C9P11712 490 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SLC1A4P43007 532 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TOB1P50616 345 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PPIDQ08752 370 aaKnown RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 MSLNQ13421 630 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 MTFR1Q15390 333 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SIX5Q8N196 739 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 ARHGAP24Q8N264 748 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CKAP2Q8WWK9 683 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 FNBP1Q96RU3 617 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 DBR1Q9UK59 544 aaKnown RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CHKBQ9Y259 395 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 RASA4BC9J798 803 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 DDX3XO00571 662 aaKnown RBP eCLIP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 RASA4O43374 803 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PGM3O95394 542 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CPA3P15088 417 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 ITGA6P23229 1130 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 GFPT1Q06210 699 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CYTH1Q15438 398 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 FXNQ16595 210 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 HSP90AA5PQ58FG0 334 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 ACAD11Q709F0 780 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CABP7Q86V35 215 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SCFD2Q8WU76 684 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 NT5C3AQ9H0P0 336 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PLAGL2Q9UPG8 496 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 KRIT1O00522 736 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 DCTN3O75935 186 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 T-ENOLP0DO92 83 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 STX2P32856 288 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms