RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 BLMHQ13867 455 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 ZNF268Q14587 947 aaPredicted RBP13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 FIGNQ5HY92 759 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 NAF1Q96HR8 494 aaKnown RBP13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 RNF14Q9UBS8 474 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 SH3BP1Q9Y3L3 701 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 COL4A3BPQ9Y5P4 624 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
PPFIA4-210ENST00000599966 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 PGRMC1O00264 195 aaKnown RBP13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 MED24O75448 989 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 MYBP10242 640 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 RANBP1P43487 201 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 TNIP1Q15025 636 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 RNF220Q5VTB9 566 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 CRELD2Q6UXH1 353 aaPredicted RBP13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 LRRC55Q6ZSA7 311 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 BARGINQ6ZT62 677 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 PEX26Q7Z412 305 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 CCDC84Q86UT8 332 aaPredicted RBP13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 SCFD2Q8WU76 684 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 TMEM237Q96Q45 408 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 PPP1R12CQ9BZL4 782 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 KCNK9Q9NPC2 374 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 PCDHGC5Q9Y5F6 944 aa13.83□□□□□ -0.19
PPFIA4-210ENST00000599966 TTLL1O95922 423 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 PAEPP09466 180 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 ERFP50548 548 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 PTK2Q05397 1052 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 SH2D3AQ9BRG2 576 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 DDX23Q9BUQ8 820 aaKnown RBP13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 CUEDC2Q9H467 287 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 RGL1Q9NZL6 768 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 IRS2Q9Y4H2 1338 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 NEFHP12036 1026 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 NR2F2P24468 414 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 FKBP3Q00688 224 aaKnown RBP13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 GUF1Q8N442 669 aaKnown RBP13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 ATP6V0A2Q9Y487 856 aa13.83□□□□□ -0.2
PPFIA4-210ENST00000599966 SERPING1P05155 500 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 CCND1P24385 295 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 ZNF76P36508 570 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 SEPT2Q15019 361 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 SLC18A3Q16572 532 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 FITM2Q8N6M3 262 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 FBXO25Q8TCJ0 367 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 TEKT4Q8WW24 435 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 DNAJC19Q96DA6 116 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 RBM17Q96I25 401 aaKnown RBP13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 RMDN2Q96LZ7 410 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 SYT15Q9BQS2 421 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 KCNMB3Q9NPA1 279 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 CHORDC1Q9UHD1 332 aaPredicted RBP13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 MYL1P05976 194 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 KRT13P13646 458 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 CASP4P49662 377 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 RAD23BP54727 409 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 TLCD1Q96CP7 247 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 ETNK1Q9HBU6 452 aa13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.82□□□□□ -0.2
PPFIA4-210ENST00000599966 AFF2P51816 1311 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 GH1P01241 217 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 GYS1P13807 737 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 ABCB4P21439 1286 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 ATP11AP98196 1134 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 KCNH2Q12809 1159 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 BORCS6Q96GS4 357 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 RPS6KC1Q96S38 1066 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■■■■■ 35.2
PPFIA4-210ENST00000599966 ERVK-5Q9HDB9 667 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 C2CD2Q9Y426 696 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 SNX3O60493 162 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 PLCG2P16885 1265 aa13.81□□□□□ -0.2
PPFIA4-210ENST00000599966 RFC5P40937 340 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms