RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ALDH7A1P49419 539 aaKnown RBP23.83■■□□□ 1.41
PNKP-212ENST00000599454 NLRP5P59047 1200 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 ITIH3Q06033 890 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 Q4G0T1 1027 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 XKR3Q5GH77 459 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 CES5AQ6NT32 575 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 HELQQ8TDG4 1101 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 ASIC4Q96FT7 647 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 ZNF668Q96K58 619 aaPredicted RBP23.83■■□□□ 1.41
PNKP-212ENST00000599454 TRAIPQ9BWF2 469 aa23.83■■□□□ 1.41
PNKP-212ENST00000599454 C2orf71A6NGG8 1288 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 PSMD10O75832 226 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 SKIP12755 728 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 DNM2P50570 870 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 IER5LQ5T953 404 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 MIER3Q7Z3K6 550 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 TRIM22Q8IYM9 498 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 TMEM169Q96HH4 297 aa23.82■■□□□ 1.4
PNKP-212ENST00000599454 INO80BQ9C086 356 aaPredicted RBP23.82■■□□□ 1.4
PNKP-212ENST00000599454 SEPT9Q9UHD8 586 aaPredicted RBP23.82■■□□□ 1.4
PNKP-212ENST00000599454 SFPQP23246 707 aaKnown RBP eCLIP23.81■■□□□ 1.4
PNKP-212ENST00000599454 PDIA3P30101 505 aaKnown RBP23.81■■□□□ 1.4
PNKP-212ENST00000599454 BCAR1P56945 870 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 ZBTB33Q86T24 672 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 ZNF410Q86VK4 478 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 FAM177A1Q8N128 213 aaPredicted RBP23.81■■□□□ 1.4
PNKP-212ENST00000599454 TBCKQ8TEA7 893 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 APOL5Q9BWW9 433 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 IRF2BPLQ9H1B7 796 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 ADAM7Q9H2U9 754 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 PCDHA4Q9UN74 947 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 HCFC2Q9Y5Z7 792 aa23.81■■□□□ 1.4
PNKP-212ENST00000599454 CYP3A7-CYP3A51PA0A087WV96 503 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 IGKV6-21A0A0C4DH24 114 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 FGFR4P22455 802 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 CYP3A7P24462 503 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 PHKA2P46019 1235 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 GIT2Q14161 759 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 MTERF2Q49AM1 385 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 MOXD1Q6UVY6 613 aa23.8■■□□□ 1.4
PNKP-212ENST00000599454 CLASP2O75122 1294 aaKnown RBP23.79■■□□□ 1.4
PNKP-212ENST00000599454 REC8O95072 547 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 MTHFRP42898 656 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 CCT2P78371 535 aaKnown RBP23.79■■□□□ 1.4
PNKP-212ENST00000599454 TCF15Q12870 199 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 DRP2Q13474 957 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 B3GNT9Q6UX72 402 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 CEP89Q96ST8 783 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 JPH2Q9BR39 696 aaPredicted RBP23.79■■□□□ 1.4
PNKP-212ENST00000599454 DZANK1Q9NVP4 752 aa23.79■■□□□ 1.4
PNKP-212ENST00000599454 A0A087WZ62 844 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 STBD1O95210 358 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 NUBP1P53384 320 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 POLGP54098 1239 aaPredicted RBP23.78■■□□□ 1.4
PNKP-212ENST00000599454 SSRP1Q08945 709 aaKnown RBP23.78■■□□□ 1.4
PNKP-212ENST00000599454 TWF2Q6IBS0 349 aaKnown RBP23.78■■□□□ 1.4
PNKP-212ENST00000599454 GALNT17Q6IS24 598 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 UBALD2Q8IYN6 164 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 RIPOR3Q96MK2 946 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 MBOAT7Q96N66 472 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 FDXACB1Q9BRP7 624 aaPredicted RBP23.78■■□□□ 1.4
PNKP-212ENST00000599454 NCOA5Q9HCD5 579 aaKnown RBP23.78■■□□□ 1.4
PNKP-212ENST00000599454 IRAK3Q9Y616 596 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 DENND4AQ7Z401 1863 aa23.78■■□□□ 1.4
PNKP-212ENST00000599454 CSDE1O75534 798 aaKnown RBP23.77■■□□□ 1.4
PNKP-212ENST00000599454 CXCL14O95715 111 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 AVPR2P30518 371 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 RAB27AP51159 221 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 GLB1LQ6UWU2 654 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 BLIDQ8IZY5 108 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 VPS52Q8N1B4 723 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 TMEM87AQ8NBN3 555 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 DAGLBQ8NCG7 672 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 GJA10Q969M2 543 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 ZBP1Q9H171 429 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 POMKQ9H5K3 350 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 SUCLA2Q9P2R7 463 aaPredicted RBP23.77■■□□□ 1.4
PNKP-212ENST00000599454 SORCS3Q9UPU3 1222 aa23.77■■□□□ 1.4
PNKP-212ENST00000599454 NT5C1B-RDH14C9J2C7 533 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 ZNF623O75123 536 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 ZC3H11AO75152 810 aaKnown RBP eCLIP23.76■■□□□ 1.39
PNKP-212ENST00000599454 MAFO75444 373 aaPredicted RBP23.76■■□□□ 1.39
PNKP-212ENST00000599454 DEXIO95424 95 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 TDP2O95551 362 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 CA8P35219 290 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 VCPP55072 806 aaKnown RBP23.76■■□□□ 1.39
PNKP-212ENST00000599454 MTMR3Q13615 1198 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 DDX53Q86TM3 631 aaKnown RBP23.76■■□□□ 1.39
PNKP-212ENST00000599454 RHPN2Q8IUC4 686 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 ETNPPLQ8TBG4 499 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 PHOX2BQ99453 314 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 TSHZ2Q9NRE2 1034 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 STK39Q9UEW8 545 aa23.76■■□□□ 1.39
PNKP-212ENST00000599454 PIN4Q9Y237 131 aaKnown RBP23.76■■□□□ 1.39
PNKP-212ENST00000599454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.75■■□□□ 1.39
PNKP-212ENST00000599454 M0R2N6 131 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
PNKP-212ENST00000599454 CTSAP10619 480 aa23.75■■□□□ 1.39
PNKP-212ENST00000599454 SP100P23497 879 aaPredicted RBP23.75■■□□□ 1.39
PNKP-212ENST00000599454 PSMC5P62195 406 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms