RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 MCM7P33993 719 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 LTBRP36941 435 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 NAALADL2Q58DX5 795 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 CLLU1OSQ5K130 101 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 RBM23Q86U06 439 aaKnown RBP17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 THNSL1Q8IYQ7 743 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 PRPF31Q8WWY3 499 aaKnown RBP17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 SLC7A3Q8WY07 619 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 LPPQ93052 612 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 C8orf76Q96K31 380 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 TMEM117Q9H0C3 514 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 CD320Q9NPF0 282 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 COL4A3BPQ9Y5P4 624 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 RALGAPA2Q2PPJ7 1873 aa17.41■□□□□ 0.38
PPFIA4-208ENST00000597023 A0A0U1RQF3 1178 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 FGF18O76093 207 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 ATF7P17544 494 aaPredicted RBP17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 CDC42EP1Q00587 391 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 CATSPER4Q7RTX7 472 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 HELQQ8TDG4 1101 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 IFT122Q9HBG6 1241 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 AAASQ9NRG9 546 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 MYO7AQ13402 2215 aa17.4■□□□□ 0.38
PPFIA4-208ENST00000597023 GRXCR2A6NFK2 248 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 POTEMA6NI47 508 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 SFPQP23246 707 aaKnown RBP eCLIP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 NRIP1P48552 1158 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 EMC2Q15006 297 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 ZNF174Q15697 407 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 ZNF598Q86UK7 904 aaKnown RBP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 KHSRPQ92945 711 aaKnown RBP eCLIP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
PPFIA4-208ENST00000597023 TTC28Q96AY4 2481 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 PER2O15055 1255 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 HOXA2O43364 376 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 TBX10O75333 385 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 LAG3P18627 525 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 RFC5P40937 340 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 PHKA2P46019 1235 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 ERVFC1P60507 584 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 LAMTOR4Q0VGL1 99 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 CTC1Q2NKJ3 1217 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 PSPC1Q8WXF1 523 aaKnown RBP17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 EPHX3Q9H6B9 360 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 CHST12Q9NRB3 414 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
PPFIA4-208ENST00000597023 MUC3AQ02505 3323 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 NT5C1B-RDH14C9J2C7 533 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 EOMESO95936 686 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 RBM10P98175 930 aaKnown RBP17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 ADAM15Q13444 863 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 KCNT2Q6UVM3 1135 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 FERMT3Q86UX7 667 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 FAM178BQ8IXR5 827 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 LRRC43Q8N309 656 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 RNF149Q8NC42 400 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 MTRQ99707 1265 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 TLR9Q9NR96 1032 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 SH2B1Q9NRF2 756 aaPredicted RBP17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 FAM105AQ9NUU6 356 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
PPFIA4-208ENST00000597023 FNDC1Q4ZHG4 1894 aaPredicted RBP17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 NCK2O43639 380 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 SSTR3P32745 418 aaPredicted RBP17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 TECP42680 631 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 NDUFV1P49821 464 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 GNL2Q13823 731 aaKnown RBP17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 NBR1Q14596 966 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 PLPP4Q5VZY2 271 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 FBXO18Q8NFZ0 1043 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 TCP11Q8WWU5 503 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 ZNF558Q96NG5 402 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 TLE6Q9H808 572 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 PPME1Q9Y570 386 aa17.36■□□□□ 0.37
PPFIA4-208ENST00000597023 BRWD1Q9NSI6 2320 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms