RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 PRRX2Q99811 253 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SH2D3AQ9BRG2 576 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 MRPL9Q9BYD2 267 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 NCOA5Q9HCD5 579 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 A0A087WZ62 844 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 CXCL14O95715 111 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 PTPN5P54829 565 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 BCAR1P56945 870 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 CDC42EP1Q00587 391 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 DRP2Q13474 957 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 LONRF3Q496Y0 759 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 Q4G0T1 1027 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 XKR3Q5GH77 459 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 TWF2Q6IBS0 349 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 CES5AQ6NT32 575 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 MRPL43Q8N983 215 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 RDM1Q8NG50 284 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 FDXACB1Q9BRP7 624 aaPredicted RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 INO80BQ9C086 356 aaPredicted RBP11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 CHST12Q9NRB3 414 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 PCDHA4Q9UN74 947 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 HCFC2Q9Y5Z7 792 aa11.88□□□□□ -0.51
CHMP2A-202ENST00000596708 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 C2orf71A6NGG8 1288 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 CPLX1O14810 134 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 PSMD10O75832 226 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 REC8O95072 547 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 TDP2O95551 362 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 SFPQP23246 707 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 RHPN2Q8IUC4 686 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 LPPQ93052 612 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 PHOX2BQ99453 314 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 SUCLA2Q9P2R7 463 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 CDH22Q9UJ99 828 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
CHMP2A-202ENST00000596708 DEXIO95424 95 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 SKIP12755 728 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 PHKA2P46019 1235 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 RNASELQ05823 741 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 ITIH3Q06033 890 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 RUFY3Q7L099 469 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 AUTS2Q8WXX7 1259 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 ASIC4Q96FT7 647 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 ADAM7Q9H2U9 754 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 POMKQ9H5K3 350 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 PIN4Q9Y237 131 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 INPP5FQ9Y2H2 1132 aa11.86□□□□□ -0.51
CHMP2A-202ENST00000596708 DENND4AQ7Z401 1863 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CYP3A7-CYP3A51PA0A087WV96 503 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 MAFO75444 373 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 STBD1O95210 358 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 WEE2P0C1S8 567 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CYP3A7P24462 503 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 AVPR2P30518 371 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 MTHFRP42898 656 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 EVCP57679 992 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 PSMC5P62195 406 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 TCF15Q12870 199 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 STK3Q13188 491 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 NONOQ15233 471 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 INF2Q27J81 1249 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 RARS2Q5T160 578 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 GLB1LQ6UWU2 654 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 KSR1Q8IVT5 923 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 KREMEN2Q8NCW0 462 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 RIPOR3Q96MK2 946 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CEP89Q96ST8 783 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 JPH2Q9BR39 696 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms