RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FAM102BQ5T8I3 360 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 SRGAP1Q7Z6B7 1085 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 ZNF598Q86UK7 904 aaKnown RBP14.56□□□□□ -0.08
USE1-207ENST00000596136 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 TMEM143Q96AN5 459 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 SCLT1Q96NL6 688 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 C11orf84Q9BUA3 381 aaPredicted RBP14.56□□□□□ -0.08
USE1-207ENST00000596136 RNF19AQ9NV58 838 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 DACT1Q9NYF0 836 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 DBR1Q9UK59 544 aaKnown RBP14.56□□□□□ -0.08
USE1-207ENST00000596136 PCDHB6Q9Y5E3 794 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 MRPL42Q9Y6G3 142 aaKnown RBP14.56□□□□□ -0.08
USE1-207ENST00000596136 NCOR1O75376 2440 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 LAD1O00515 517 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 MED24O75448 989 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 EOMESO95936 686 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 FGFR4P22455 802 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 SFPQP23246 707 aaKnown RBP eCLIP14.55□□□□□ -0.08
USE1-207ENST00000596136 CTNNB1P35222 781 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 GATMP50440 423 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 PTGDRQ13258 359 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 MXD4Q14582 209 aaPredicted RBP14.55□□□□□ -0.08
USE1-207ENST00000596136 NBR1Q14596 966 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 PTPROQ16827 1216 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 ECHDC2Q86YB7 292 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
USE1-207ENST00000596136 MICALL1Q8N3F8 863 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 IGSF22Q8N9C0 903 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 MTRQ99707 1265 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 LMAN2LQ9H0V9 348 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 ATP6V0A4Q9HBG4 840 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.55□□□□□ -0.08
USE1-207ENST00000596136 COG5Q9UP83 839 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 KIAA1671Q9BY89 1806 aa14.55□□□□□ -0.08
USE1-207ENST00000596136 HOXA2O43364 376 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 ZNF623O75123 536 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 ATF7P17544 494 aaPredicted RBP14.54□□□□□ -0.08
USE1-207ENST00000596136 ARL2P36404 184 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 PRPHP41219 470 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 PCBP1Q15365 356 aaKnown RBP eCLIP14.54□□□□□ -0.08
USE1-207ENST00000596136 RILPL1Q5EBL4 403 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 ERMNQ8TAM6 284 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 NLRP4Q96MN2 994 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 CASD1Q96PB1 797 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 ASB2Q96Q27 587 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 TMEM117Q9H0C3 514 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 MINDY3Q9H8M7 445 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 PLAGL2Q9UPG8 496 aa14.54□□□□□ -0.08
USE1-207ENST00000596136 TBKBP1A7MCY6 615 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 DLL1O00548 723 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 GRM6O15303 877 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 FGFR1P11362 822 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 HOXA11P31270 313 aaPredicted RBP14.53□□□□□ -0.08
USE1-207ENST00000596136 PTENP60484 403 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
USE1-207ENST00000596136 CAMK1Q14012 370 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 COL19A1Q14993 1142 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 PAN2Q504Q3 1202 aaKnown RBP14.53□□□□□ -0.08
USE1-207ENST00000596136 TJAP1Q5JTD0 557 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 COL25A1Q9BXS0 654 aaPredicted RBP14.53□□□□□ -0.08
USE1-207ENST00000596136 NFKBIZQ9BYH8 718 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 CWH43Q9H720 699 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 AGPAT5Q9NUQ2 364 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 ATG2AQ2TAZ0 1938 aa14.53□□□□□ -0.08
USE1-207ENST00000596136 A0A087WWV3 80 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.52□□□□□ -0.09
USE1-207ENST00000596136 H3BQV1 296 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 ITGB1P05556 798 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 SRGAP2CP0DJJ0 459 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 SKIP12755 728 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 PHKA2P46019 1235 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 IL17AQ16552 155 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 ECM1Q16610 540 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 TIGD5Q53EQ6 642 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 CLLU1OSQ5K130 101 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 LARP1BQ659C4 914 aaKnown RBP14.52□□□□□ -0.09
USE1-207ENST00000596136 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 MCTP1Q6DN14 999 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 CATSPER4Q7RTX7 472 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 SPPL3Q8TCT6 385 aa14.52□□□□□ -0.09
USE1-207ENST00000596136 BMP2KQ9NSY1 1161 aaPredicted RBP14.52□□□□□ -0.09
USE1-207ENST00000596136 TYW1Q9NV66 732 aaKnown RBP14.52□□□□□ -0.09
USE1-207ENST00000596136 GLRA2P23416 452 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 RAB27AP51159 221 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 ATP2C1P98194 919 aaPredicted RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 TFDP1Q14186 410 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 SKIV2LQ15477 1246 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 AAK1Q2M2I8 961 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 KLHL23Q8NBE8 558 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms