RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GUF1Q8N442 669 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-209ENST00000595803 IFT74Q96LB3 600 aa14.41□□□□□ -0.1
SHKBP1-209ENST00000595803 PRKAG2Q9UGJ0 569 aa14.41□□□□□ -0.1
SHKBP1-209ENST00000595803 ARIH1Q9Y4X5 557 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-209ENST00000595803 MAFO75444 373 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 GCNT3O95395 438 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 C6orf222P0C671 652 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 ZNF286BP0CG31 522 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 MAPTP10636 758 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 CCNE1P24864 410 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 CCND3P30281 292 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 SMTNP53814 917 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 GJA9P57773 515 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 BEX3Q00994 111 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 MAPK7Q13164 816 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 EMC2Q15006 297 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 FSCN1Q16658 493 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 GNASQ5JWF2 1037 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 DAW1Q8N136 415 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 ATXN2LQ8WWM7 1075 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 TCP11Q8WWU5 503 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 P2RX5Q93086 422 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 ASB2Q96Q27 587 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 TSG101Q99816 390 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 C17orf75Q9HAS0 396 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 GPRC5CQ9NQ84 441 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 HCN4Q9Y3Q4 1203 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 SYNRGQ9UMZ2 1314 aa14.4□□□□□ -0.1
SHKBP1-209ENST00000595803 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 MAGEB2O15479 319 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 PRPF6O94906 941 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 INSRRP14616 1297 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 NMT1P30419 496 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 PEX3P56589 373 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 CHMP4BP1P59074 171 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 IGBP1P78318 339 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 GRIN2CQ14957 1233 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 NCAPHQ15003 741 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 IER5Q5VY09 327 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 LHX8Q68G74 356 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 ZNF720Q7Z2F6 126 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 SNX27Q96L92 541 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 CEP89Q96ST8 783 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 C1QTNF1Q9BXJ1 281 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 POLR3FQ9H1D9 316 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 UPF3AQ9H1J1 476 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 SUGCTQ9HAC7 445 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 XPNPEP1Q9NQW7 623 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 FANCLQ9NW38 375 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 NFE2L3Q9Y4A8 694 aa14.39□□□□□ -0.11
SHKBP1-209ENST00000595803 COL1A2P08123 1366 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 RRN3P2A6NIE6 340 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 EIF3DO15371 548 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 GAS2O43903 313 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 MYBP10242 640 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 KLRC1P26715 233 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 ARL2P36404 184 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 PSEN2P49810 448 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 DNM2P50570 870 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 RTP1P59025 263 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 ALCAMQ13740 583 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 MFSD10Q14728 455 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 PPP2R5AQ15172 486 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 ANKRD40Q6AI12 368 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 CENPPQ6IPU0 288 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 EPM2AIP1Q7L775 607 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 NELFCDQ8IXH7 590 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 RETREG2Q8NC44 543 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 GLIS3Q8NEA6 775 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 SCFD1Q8WVM8 642 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 SENP6Q9GZR1 1112 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 XPNPEP3Q9NQH7 507 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 DDX20Q9UHI6 824 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-209ENST00000595803 H0YCG3 227 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 K7ENM7 598 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 MSCO60682 206 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 PGK1P00558 417 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 NKX3-2P78367 333 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 PPFIA1Q13136 1202 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 KNOP1Q1ED39 458 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 EFCAB12Q6NXP0 572 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 TRAPPC12Q8WVT3 735 aa14.37□□□□□ -0.11
SHKBP1-209ENST00000595803 SPIRE2Q8WWL2 714 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms