RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 EYA4O95677 639 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 ALADP13716 330 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 SFPQP23246 707 aaKnown RBP eCLIP20.07■□□□□ 0.8
HOMER3-208ENST00000595756 PPM1AP35813 382 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 NRIP1P48552 1158 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 PDE12Q6L8Q7 609 aaKnown RBP20.07■□□□□ 0.8
HOMER3-208ENST00000595756 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 ANO5Q75V66 913 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 ZNF598Q86UK7 904 aaKnown RBP20.07■□□□□ 0.8
HOMER3-208ENST00000595756 NECAB1Q8N987 351 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 RSPH1Q8WYR4 309 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 CDCA3Q99618 268 aaPredicted RBP20.07■□□□□ 0.8
HOMER3-208ENST00000595756 LLPHQ9BRT6 129 aaKnown RBP20.07■□□□□ 0.8
HOMER3-208ENST00000595756 CHST12Q9NRB3 414 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 EML1O00423 815 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 FSCN2O14926 492 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 CCNT1O60563 726 aaKnown RBP20.06■□□□□ 0.8
HOMER3-208ENST00000595756 LARGE1O95461 756 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 GLP2RO95838 553 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 EOMESO95936 686 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 QARSP47897 775 aaKnown RBP20.06■□□□□ 0.8
HOMER3-208ENST00000595756 PLCB3Q01970 1234 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 COASYQ13057 564 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 CLLU1OSQ5K130 101 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 SMRP1Q8NCR6 262 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 OXER1Q8TDS5 423 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 MRPS27Q92552 414 aaKnown RBP20.06■□□□□ 0.8
HOMER3-208ENST00000595756 SH2D3AQ9BRG2 576 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 TRAIPQ9BWF2 469 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 MRPL9Q9BYD2 267 aaKnown RBP20.06■□□□□ 0.8
HOMER3-208ENST00000595756 CLEC1BQ9P126 229 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 ORC3Q9UBD5 711 aaPredicted RBP20.06■□□□□ 0.8
HOMER3-208ENST00000595756 PCDHGC5Q9Y5F6 944 aa20.06■□□□□ 0.8
HOMER3-208ENST00000595756 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 P4HBP07237 508 aaKnown RBP20.05■□□□□ 0.8
HOMER3-208ENST00000595756 ATF7P17544 494 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-208ENST00000595756 FGFR4P22455 802 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 PLA2G4FQ68DD2 849 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 HAS1Q92839 578 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 ZNF558Q96NG5 402 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 INO80BQ9C086 356 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-208ENST00000595756 TLE6Q9H808 572 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 BRMS1Q9HCU9 246 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 CYP26B1Q9NR63 512 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 GJB4Q9NTQ9 266 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 SUCLA2Q9P2R7 463 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-208ENST00000595756 HCN4Q9Y3Q4 1203 aa20.05■□□□□ 0.8
HOMER3-208ENST00000595756 A0A087WZ62 844 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 FAM86C2PA6NEL3 165 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 DCXO43602 365 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 KRT2P35908 639 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 DUSP6Q16828 381 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 KCNT2Q6UVM3 1135 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 RBM23Q86U06 439 aaKnown RBP20.04■□□□□ 0.8
HOMER3-208ENST00000595756 RHPN2Q8IUC4 686 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 EXOC8Q8IYI6 725 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 SLFN12Q8IYM2 578 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 RNF169Q8NCN4 708 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 SLC7A3Q8WY07 619 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 TNFRSF25Q93038 417 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 FDXACB1Q9BRP7 624 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-208ENST00000595756 LXNQ9BS40 222 aa20.04■□□□□ 0.8
HOMER3-208ENST00000595756 BARX2Q9UMQ3 279 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-208ENST00000595756 ARIH1Q9Y4X5 557 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-208ENST00000595756 PRR33A8MZF0 331 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 FDPSP14324 419 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 PHKA2P46019 1235 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 ERVFC1P60507 584 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 HMGN5P82970 282 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 SPIRE1Q08AE8 756 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 EPHA7Q15375 998 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 EARS2Q5JPH6 523 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 CCDC83Q8IWF9 413 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 C4orf19Q8IY42 314 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 NSUN7Q8NE18 718 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 HELQQ8TDG4 1101 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 MICAL1Q8TDZ2 1067 aa20.03■□□□□ 0.8
HOMER3-208ENST00000595756 DHX33Q9H6R0 707 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 WRAP73Q9P2S5 460 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 PUF60Q9UHX1 559 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 PIN4Q9Y237 131 aaKnown RBP20.03■□□□□ 0.8
HOMER3-208ENST00000595756 GAS2O43903 313 aaKnown RBP20.02■□□□□ 0.8
HOMER3-208ENST00000595756 CSDE1O75534 798 aaKnown RBP20.02■□□□□ 0.8
HOMER3-208ENST00000595756 SKIP12755 728 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 PLA2G5P39877 138 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 RFC5P40937 340 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 RAB27AP51159 221 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 POLGP54098 1239 aaPredicted RBP20.02■□□□□ 0.8
HOMER3-208ENST00000595756 NR5A1Q13285 461 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 PLPP4Q5VZY2 271 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 CEP170P1Q96L14 293 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 NLRP4Q96MN2 994 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 TCF25Q9BQ70 676 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 NGRNQ9NPE2 291 aaKnown RBP20.02■□□□□ 0.8
HOMER3-208ENST00000595756 ENTPD7Q9NQZ7 604 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 COL4A3BPQ9Y5P4 624 aa20.02■□□□□ 0.8
HOMER3-208ENST00000595756 CARNS1A5YM72 827 aa20.01■□□□□ 0.79
HOMER3-208ENST00000595756 FAM205CA6NFA0 338 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms